RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 HPNP05981 417 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 CERS1P27544 350 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 CPOXP36551 454 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 RGS4P49798 205 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 CDK9P50750 372 aaKnown RBP12.74□□□□□ -0.37
LINC00642-202ENST00000442515 NR1H2P55055 460 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 LIM2P55344 173 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 TIAL1Q01085 375 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC00642-202ENST00000442515 TNK1Q13470 666 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 THOC5Q13769 683 aaKnown RBP12.74□□□□□ -0.37
LINC00642-202ENST00000442515 DHX34Q14147 1143 aaKnown RBP12.74□□□□□ -0.37
LINC00642-202ENST00000442515 NHSL2Q5HYW2 709 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 C10orf62Q5T681 223 aaPredicted RBP12.74□□□□□ -0.37
LINC00642-202ENST00000442515 UGT3A1Q6NUS8 523 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 CASC4Q6P4E1 433 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 NXPE4Q6UWF7 544 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 KLHDC8AQ8IYD2 350 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 MEIOBQ8N635 442 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 GABPB2Q8TAK5 448 aaPredicted RBP12.74□□□□□ -0.37
LINC00642-202ENST00000442515 ZNF669Q96BR6 464 aaPredicted RBP12.74□□□□□ -0.37
LINC00642-202ENST00000442515 MS4A6EQ96DS6 147 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 LINGO1Q96FE5 620 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 PIGQQ9BRB3 760 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 LACRTQ9GZZ8 138 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 UBQLN3Q9H347 655 aa12.74□□□□□ -0.37
LINC00642-202ENST00000442515 A0A088AWK7 358 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 TCRBV7S3A2A0A539 114 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 PABPN1LA6NDY0 278 aaKnown RBP12.73□□□□□ -0.37
LINC00642-202ENST00000442515 LDB3O75112 727 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 SOX30O94993 753 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 ACSL3O95573 720 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 FBXO45P0C2W1 286 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 PAX1P15863 534 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 ZNF10P21506 573 aaPredicted RBP12.73□□□□□ -0.37
LINC00642-202ENST00000442515 SOX18P35713 384 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 PLA2G16P53816 162 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 AP1S2P56377 157 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 ID2Q02363 134 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
LINC00642-202ENST00000442515 RCAN2Q14206 197 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 DND1Q8IYX4 353 aaKnown RBP12.73□□□□□ -0.37
LINC00642-202ENST00000442515 ZNF441Q8N8Z8 693 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 SLC44A1Q8WWI5 657 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 FBXL8Q96CD0 374 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 QRFPRQ96P65 431 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 NDNQ99608 321 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 KLHL28Q9NXS3 571 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 DAPP1Q9UN19 280 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 DYRK1BQ9Y463 629 aa12.73□□□□□ -0.37
LINC00642-202ENST00000442515 LRIT2A6NDA9 550 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 A8MXE2 369 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 HAUS5O94927 633 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 GUCA1CO95843 209 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 IGKV3-11P04433 115 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 TPSB2P20231 275 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 CRYGSP22914 178 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 MC3RP41968 323 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 SERTAD2Q14140 314 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 EFTUD2Q15029 972 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00642-202ENST00000442515 TPSAB1Q15661 275 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 PAQR3Q6TCH7 311 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 HIPK1Q86Z02 1210 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 GCNT2Q8N0V5 402 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 SLC15A4Q8N697 577 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 GPATCH11Q8N954 259 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 ZPLD1Q8TCW7 415 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 IGFBPL1Q8WX77 278 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 ATL1Q8WXF7 558 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 CCT6BQ92526 530 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 ABTB1Q969K4 478 aaPredicted RBP12.72□□□□□ -0.37
LINC00642-202ENST00000442515 INTS12Q96CB8 462 aaKnown RBP12.72□□□□□ -0.37
LINC00642-202ENST00000442515 ZFP3Q96NJ6 502 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 WFIKKN1Q96NZ8 548 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 ZNF226Q9NYT6 803 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 PACSIN3Q9UKS6 424 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 C15orf41Q9Y2V0 281 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 REXO2Q9Y3B8 237 aaKnown RBP12.72□□□□□ -0.37
LINC00642-202ENST00000442515 WIF1Q9Y5W5 379 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 MAD1L1Q9Y6D9 718 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 IKBKGQ9Y6K9 419 aa12.72□□□□□ -0.37
LINC00642-202ENST00000442515 EML6Q6ZMW3 1958 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 NCKAP5O14513 1909 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 A0A087X1B8 175 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 ZCWPW2A0A1B0GU75 182 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 RNF223E7ERA6 249 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 SNPHO15079 494 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 WIPF1O43516 503 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 RCBTB2O95199 551 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 CYP4B1P13584 511 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 SERPINB3P29508 390 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 MSH2P43246 934 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 DIO3P55073 304 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 ATP5J2P56134 94 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 CDK16Q00536 496 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 FAM27E3Q08E93 113 aa12.71□□□□□ -0.37
LINC00642-202ENST00000442515 RCN2Q14257 317 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms