RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 ZCCHC10Q8TBK6 192 aa17.72■□□□□ 0.43
POLR1E-203ENST00000442009 GATA6Q92908 595 aa17.72■□□□□ 0.43
POLR1E-203ENST00000442009 MAP3K3Q99759 626 aa17.72■□□□□ 0.43
POLR1E-203ENST00000442009 IL21RQ9HBE5 538 aa17.72■□□□□ 0.43
POLR1E-203ENST00000442009 LYRM4Q9HD34 91 aa17.72■□□□□ 0.43
POLR1E-203ENST00000442009 PHF11Q9UIL8 331 aa17.72■□□□□ 0.43
POLR1E-203ENST00000442009 MUC3AQ02505 3323 aa17.72■□□□□ 0.43
POLR1E-203ENST00000442009 PDLIM1O00151 329 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 B3GALT2O43825 422 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 RASAL1O95294 804 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 ARAFP10398 606 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 NR2F6P10588 404 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 SPTBP11277 2137 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 GABRA4P48169 554 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 CCT3P49368 545 aaKnown RBP17.71■□□□□ 0.43
POLR1E-203ENST00000442009 PCBP3P57721 371 aaKnown RBP17.71■□□□□ 0.43
POLR1E-203ENST00000442009 TNFRSF17Q02223 184 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 LRRC23Q53EV4 343 aaPredicted RBP17.71■□□□□ 0.43
POLR1E-203ENST00000442009 C6orf132Q5T0Z8 1188 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 ANGPTL8Q6UXH0 198 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 TMEM64Q6YI46 380 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 OR10Q1Q8NGQ4 319 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 ZNF285Q96NJ3 590 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 NR1H4Q96RI1 486 aaPredicted RBP17.71■□□□□ 0.43
POLR1E-203ENST00000442009 BBS4Q96RK4 519 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 CHRNA10Q9GZZ6 450 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 IL1RAPQ9NPH3 570 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 ZSCAN32Q9NX65 697 aa17.71■□□□□ 0.43
POLR1E-203ENST00000442009 A0A1W2PS29 197 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 GALR3O60755 368 aaPredicted RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 ERAL1O75616 437 aaKnown RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 EIF2S1P05198 315 aaKnown RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 CTSBP07858 339 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 CSNK2A2P19784 350 aaPredicted RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 ZNF10P21506 573 aaPredicted RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 NTSP30990 170 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 PRIM2P49643 509 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 NCBP2P52298 156 aaKnown RBP eCLIP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 VSX2P58304 361 aaPredicted RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 CDK6Q00534 326 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 SRSF5Q13243 272 aaKnown RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 SCARB2Q14108 478 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 ELOAQ14241 798 aaKnown RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 MYBPC3Q14896 1274 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 PRTGQ2VWP7 1150 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 ZNF750Q32MQ0 723 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 IQCCQ4KMZ1 466 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 NHSL2Q5HYW2 709 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 PRSS41Q7RTY9 318 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 MCATQ8IVS2 390 aaKnown RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 HORMAD2Q8N7B1 307 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 ZFP28Q8NHY6 868 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 GAB3Q8WWW8 586 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 TCTN2Q96GX1 697 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 ELF4Q99607 663 aaPredicted RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 SERHL2Q9H4I8 314 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 MS4A12Q9NXJ0 267 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 PILRBQ9UKJ0 227 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 RNF215Q9Y6U7 377 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 KIF1CO43896 1103 aaKnown RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 SRPX2O60687 465 aaPredicted RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 ZNF682O95780 498 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 MAGEA8P43361 318 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 DSTNP60981 165 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 MED21Q13503 144 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 ZC3H12BQ5HYM0 836 aaKnown RBP17.7■□□□□ 0.42
POLR1E-203ENST00000442009 CRB2Q5IJ48 1285 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 C11orf74Q86VG3 221 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 CCDC116Q8IYX3 515 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 MARVELD2Q8N4S9 558 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 TBC1D20Q96BZ9 403 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 A4GALTQ9NPC4 353 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 PSME2Q9UL46 239 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 AP4B1Q9Y6B7 739 aa17.7■□□□□ 0.42
POLR1E-203ENST00000442009 NUDT21O43809 227 aaKnown RBP17.69■□□□□ 0.42
POLR1E-203ENST00000442009 C9P02748 559 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 TFPTP0C1Z6 253 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 BUD31P41223 144 aaPredicted RBP17.69■□□□□ 0.42
POLR1E-203ENST00000442009 DHPSP49366 369 aaPredicted RBP17.69■□□□□ 0.42
POLR1E-203ENST00000442009 MAPK11Q15759 364 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 CYBRD1Q53TN4 286 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 TBPL2Q6SJ96 375 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 CEACAM20Q6UY09 585 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 KANSL1Q7Z3B3 1105 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 PIWIL3Q7Z3Z3 882 aaKnown RBP17.69■□□□□ 0.42
POLR1E-203ENST00000442009 VTCN1Q7Z7D3 282 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 SLC35F3Q8IY50 421 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 NFKBIDQ8NI38 313 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 SFXN5Q8TD22 340 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 TMBIM1Q969X1 311 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 CSF3RQ99062 836 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 LRIT1Q9P2V4 623 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 PADI4Q9UM07 663 aa17.69■□□□□ 0.42
POLR1E-203ENST00000442009 SCN2AQ99250 2005 aa17.68■□□□□ 0.42
POLR1E-203ENST00000442009 CYR61O00622 381 aa17.68■□□□□ 0.42
POLR1E-203ENST00000442009 LAMTOR5O43504 91 aa17.68■□□□□ 0.42
POLR1E-203ENST00000442009 CST1P01037 141 aa17.68■□□□□ 0.42
POLR1E-203ENST00000442009 CPN2P22792 545 aa17.68■□□□□ 0.42
POLR1E-203ENST00000442009 MPIP34949 423 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms