RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SPINK14Q6IE38 97 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 OR52E8Q6IFG1 317 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 LETMD1Q6P1Q0 360 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 SH2D5Q6ZV89 423 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 RPS27LQ71UM5 84 aaKnown RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 OR4N5Q8IXE1 308 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 GPALPP1Q8IXQ4 340 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 ST13P4Q8IZP2 240 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 KIF2BQ8N4N8 673 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 CDYL2Q8N8U2 506 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 APCDD1LQ8NCL9 501 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 OR8K3Q8NH51 312 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 SREK1Q8WXA9 508 aaKnown RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 CAVIN3Q969G5 261 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 ANKRD9Q96BM1 317 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 BARD1Q99728 777 aaKnown RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 FAIM2Q9BWQ8 316 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 OR8D2Q9GZM6 311 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 MID1IP1Q9NPA3 183 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 ANKRD10Q9NXR5 420 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 ATG4BQ9Y4P1 393 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 CLDN16Q9Y5I7 305 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF462Q96JM2 2506 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 MYOCOSA0A1B0GUC4 107 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 A0A1W2PR48 441 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 C1orf226A1L170 272 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 G3V2L1 256 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 KLRC4-KLRK1H3BQV0 150 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 TGFBR3LH3BV60 316 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 MANBAO00462 879 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 TMPRSS11DO60235 418 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 FGF17O60258 216 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 EEDO75530 441 aaKnown RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ITGA10O75578 1167 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 AGFG2O95081 481 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ZIC2O95409 532 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ESRRBO95718 433 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 PROCP04070 461 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 SP1P08047 785 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 TPP2P29144 1249 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 GALNSP34059 522 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 TRHRP34981 398 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 SSR4P51571 173 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 GPR143P51810 404 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 NAGLUP54802 743 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 TRA2BP62995 288 aaKnown RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 IGLV3-21P80748 117 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ID2Q02363 134 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 RBPJQ06330 500 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 IMPG1Q17R60 797 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ERCC6LQ2NKX8 1250 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 LIPMQ5VYY2 423 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 CROCCP2Q86T23 111 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 C4orf33Q8N1A6 199 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ARMC10Q8N2F6 343 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 AMER2Q8N7J2 671 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 OR4K14Q8NGD5 310 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 SLC2A12Q8TD20 617 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 AENQ8WTP8 325 aaKnown RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 THAP3Q8WTV1 239 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 PTPMT1Q8WUK0 201 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ASB15Q8WXK1 588 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 NR4A3Q92570 626 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 SIGLEC12Q96PQ1 595 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 SMC6Q96SB8 1091 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 NPAS2Q99743 824 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF717Q9BY31 904 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 MRPL1Q9BYD6 325 aaKnown RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 PARD6BQ9BYG5 372 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 TRIM45Q9H8W5 580 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 KLHL1Q9NR64 748 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 ERVK-11Q9UQG0 969 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 NTNG1Q9Y2I2 539 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 KLF13Q9Y2Y9 288 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 V9GYY5 206 aaPredicted RBP9.75□□□□□ -0.85
MCF2L-216ENST00000439475 SHANK1Q9Y566 2161 aa9.75□□□□□ -0.85
MCF2L-216ENST00000439475 SERTM1A2A2V5 107 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 GOLGA6L10A6NI86 522 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 A8MVJ9 347 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 TRIM13O60858 407 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 AIFM1O95831 613 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 GBAP04062 536 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 SLC35E2P0CK97 266 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 UQCRFS1P47985 274 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 RNF4P78317 190 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 ALDH6A1Q02252 535 aaKnown RBP9.74□□□□□ -0.85
MCF2L-216ENST00000439475 ACSM2AQ08AH3 577 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 MRPL49Q13405 166 aaKnown RBP9.74□□□□□ -0.85
MCF2L-216ENST00000439475 KRTCAP3Q53RY4 240 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 SPIN4Q56A73 249 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 ACSM2BQ68CK6 577 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 OPN5Q6U736 354 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 SLC29A4Q7RTT9 530 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 GALNTL5Q7Z4T8 443 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 MREGQ8N565 214 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 POGLUT1Q8NBL1 392 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 MDS2Q8NDY4 140 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 OR2W6PQ8NHA6 318 aa9.74□□□□□ -0.85
MCF2L-216ENST00000439475 RIT1Q92963 219 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms