RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 LRFN1Q9P244 771 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 ZNF225Q9UK10 706 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 TLDC2A0PJX2 215 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 FOXO6A8MYZ6 492 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 G3V2L1 256 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 PLIN3O60664 434 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 PROCP04070 461 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 HSD3B1P14060 373 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 HSD3B2P26439 372 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 HMOX2P30519 316 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 TRHRP34981 398 aaPredicted RBP23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 STT3AP46977 705 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 FOLH1Q04609 750 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 HSDL2Q6YN16 418 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 METTL4Q8N3J2 472 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 CCDC63Q8NA47 563 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 DNAJB8Q8NHS0 232 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 METTL6Q8TCB7 284 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 CAVIN3Q969G5 261 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 SLX1AQ9BQ83 275 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 OR8D2Q9GZM6 311 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 FARSBQ9NSD9 589 aaKnown RBP23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 COPS7AQ9UBW8 275 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 MID2Q9UJV3 735 aa23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 ZNF223Q9UK11 482 aaPredicted RBP23.04■■□□□ 1.28
RAPGEF1-206ENST00000438647 MYOCOSA0A1B0GUC4 107 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 A0A1W2PR48 441 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 GUCY1B2O75343 617 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 GBAP04062 536 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 ENO1P06733 434 aaKnown RBP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 KLK1P06870 262 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 HLCSP50747 726 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 EIF2S3LQ2VIR3 472 aaKnown RBP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 CCNYL2Q5T2Q4 361 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 SPINK14Q6IE38 97 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 OR52E8Q6IFG1 317 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 OR4N5Q8IXE1 308 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 FAM98AQ8NCA5 519 aaKnown RBP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 OR2W6PQ8NHA6 318 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 PRR7Q8TB68 274 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 SLC2A12Q8TD20 617 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 THAP3Q8WTV1 239 aaPredicted RBP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 TMEM125Q96AQ2 219 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 SCMH1Q96GD3 660 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 ART5Q96L15 291 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 TAAR6Q96RI8 345 aa23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 ROPN1BQ9BZX4 212 aaPredicted RBP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 TRIM45Q9H8W5 580 aaPredicted RBP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 ROPN1Q9HAT0 212 aaPredicted RBP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 V9GYY5 206 aaPredicted RBP23.03■■□□□ 1.28
RAPGEF1-206ENST00000438647 H3BQF6 201 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 MANBAO00462 879 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 ULK1O75385 1050 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 PRKRAO75569 313 aaKnown RBP23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 ITGA10O75578 1167 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 NEURL1O76050 574 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 GPR75O95800 540 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 AIFM1O95831 613 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 ALOX15P16050 662 aaPredicted RBP23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 SLC18A2Q05940 514 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 CSTF3Q12996 717 aaKnown RBP23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 COMMD6Q7Z4G1 85 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 ST13P4Q8IZP2 240 aaPredicted RBP23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 C4orf33Q8N1A6 199 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 TMEM156Q8N614 296 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 CCNYL1Q8N7R7 359 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 OR8K3Q8NH51 312 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 NR4A3Q92570 626 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 IQCGQ9H095 443 aaKnown RBP23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 GSTO2Q9H4Y5 243 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 KLHL1Q9NR64 748 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 VPS29Q9UBQ0 182 aa23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 YARS2Q9Y2Z4 477 aaKnown RBP23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 ASH1LQ9NR48 2969 aaKnown RBP23.02■■□□□ 1.28
RAPGEF1-206ENST00000438647 OR10H2O60403 315 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 SLC25A12O75746 678 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 AGFG2O95081 481 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 ESRRBO95718 433 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 DDAH2O95865 285 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 ST13P50502 369 aaKnown RBP23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 MAPK12P53778 367 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 DNAJB13P59910 316 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 CFAP157Q5JU67 520 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 ZNF324BQ6AW86 544 aaPredicted RBP23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 SLC25A25Q6KCM7 469 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 GBP7Q8N8V2 638 aaPredicted RBP23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 OR5L2Q8NGL0 311 aa23.01■■□□□ 1.27
RAPGEF1-206ENST00000438647 FLNBO75369 2602 aaKnown RBP23■■□□□ 1.27
RAPGEF1-206ENST00000438647 LRRK2Q5S007 2527 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 GLOD5A6NK44 160 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 SP1P08047 785 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 CPA3P15088 417 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 SSR4P51571 173 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 SRSF1Q07955 248 aaKnown RBP eCLIP23■■□□□ 1.27
RAPGEF1-206ENST00000438647 ERCC6LQ2NKX8 1250 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 ZNF468Q5VIY5 522 aaPredicted RBP23■■□□□ 1.27
RAPGEF1-206ENST00000438647 AGAP11Q8TF27 550 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 HBEGFQ99075 208 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 MID1IP1Q9NPA3 183 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms