RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 ALG10BQ5I7T1 473 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 FRG2Q64ET8 278 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 OR2A2Q6IF42 318 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 TCTN3Q6NUS6 607 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 VSTM1Q6UX27 236 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 WASH2PQ6VEQ5 465 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 HSDL2Q6YN16 418 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 ZNF852Q6ZMS4 543 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 NDUFAF7Q7L592 441 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 TRMT1LQ7Z2T5 733 aaKnown RBP4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 WDR53Q7Z5U6 358 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 FNDC5Q8NAU1 212 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 OR10Q1Q8NGQ4 319 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 SCARB1Q8WTV0 552 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 ELMO1Q92556 727 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 P3H4Q92791 437 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 TMEM18Q96B42 140 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 MTERF3Q96E29 417 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 CCDC17Q96LX7 622 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 FAM20AQ96MK3 541 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 GNRHR2Q96P88 292 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 INPP4AQ96PE3 977 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 TRNT1Q96Q11 434 aaKnown RBP4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 ALS2CR12Q96Q35 445 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 UBAC1Q9BSL1 405 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 LRRC2Q9BYS8 371 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 MFFQ9GZY8 342 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 RIMS4Q9H426 269 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 ACTL8Q9H568 366 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 AZI2Q9H6S1 392 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 ZNF275Q9NSD4 429 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 SPHK1Q9NYA1 384 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 HACD3Q9P035 362 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 LHX3Q9UBR4 397 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 TINAGQ9UJW2 476 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 GGA2Q9UJY4 613 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 ADAM28Q9UKQ2 775 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 CA5BQ9Y2D0 317 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 LOXL2Q9Y4K0 774 aa4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 SPIN1Q9Y657 262 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P10-201ENST00000434734 TRAV18A0A075B6X5 111 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 A0A1W2PP11 408 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 OR6C65A6NJZ3 312 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 BCKDKO14874 412 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 NOBOXO60393 691 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 CABYRO75952 493 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 WISP2O76076 250 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 NDUFA10O95299 355 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 TSPAN12O95859 305 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 HPRP00739 348 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 CST1P01037 141 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 FTH1P02794 183 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 LYNP07948 512 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 ANPEPP15144 967 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 TNFSF8P32971 234 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 CSTF2P33240 577 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 CASP4P49662 377 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 NDST1P52848 882 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 BLVRAP53004 296 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 RAD23BP54727 409 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 MYBPHQ13203 477 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 NME3Q13232 169 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 HEPACAMQ14CZ8 416 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 ANGPT1Q15389 498 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 ZSWIM7Q19AV6 140 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 MICBQ29980 383 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 BEAN1Q3B7T3 259 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 RAB6CQ53S08 254 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 PDZK1Q5T2W1 519 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 C11orf63Q6NUN7 778 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 CCDC137Q6PK04 289 aaKnown RBP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 CENPUQ71F23 418 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 G2E3Q7L622 706 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 DPY19L4Q7Z388 723 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 PATL1Q86TB9 770 aaKnown RBP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 COMMD2Q86X83 199 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 GSPT2Q8IYD1 628 aaKnown RBP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 RBFAQ8N0V3 343 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 LNX2Q8N448 690 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 SPEM1Q8N4L4 309 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 SLC25A41Q8N5S1 370 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 ALLCQ8N6M5 410 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 ADAD2Q8NCV1 583 aaKnown RBP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 ZNF548Q8NEK5 533 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 TRPV1Q8NER1 839 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 OR4K1Q8NGD4 311 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 ANGPTL6Q8NI99 470 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 M1APQ8TC57 530 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 SCFD1Q8WVM8 642 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 CACNG8Q8WXS5 425 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 NRGNQ92686 78 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 DAZLQ92904 295 aaKnown RBP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 LHX4Q969G2 390 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 DACT3Q96B18 629 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 RBM41Q96IZ5 413 aaKnown RBP4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 CCDC3Q9BQI4 270 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 ST6GALNAC5Q9BVH7 336 aa4.88□□□□□ -1.63
HMGB3P10-201ENST00000434734 RAB6CQ9H0N0 254 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms