RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 CHD6Q8TD26 2715 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 ATRXP46100 2492 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 SERTM1A2A2V5 107 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 SAGE2PA6NJ88 616 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 ERAL1O75616 437 aaKnown RBP14.53□□□□□ -0.08
TREX1-201ENST00000433541 SASH3O75995 380 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 SNUPNO95149 360 aaKnown RBP14.53□□□□□ -0.08
TREX1-201ENST00000433541 FGF4P08620 206 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 ITGAMP11215 1152 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 RPL38P63173 70 aaKnown RBP14.53□□□□□ -0.08
TREX1-201ENST00000433541 ZNF763Q0D2J5 394 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 Q0VFX4 171 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 BST1Q10588 318 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 PLAG1Q6DJT9 500 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 TCTN3Q6NUS6 607 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 PCSK4Q6UW60 755 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 LINC00696Q6ZRV3 163 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 RIPOR1Q6ZS17 1223 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 KIRREL3Q8IZU9 778 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 TMEM132CQ8N3T6 1108 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 ZNF781Q8N8C0 355 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 LSM14AQ8ND56 463 aaKnown RBP14.53□□□□□ -0.08
TREX1-201ENST00000433541 C7orf57Q8NEG2 295 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 BRIX1Q8TDN6 353 aaKnown RBP14.53□□□□□ -0.08
TREX1-201ENST00000433541 TM9SF4Q92544 642 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 DAZLQ92904 295 aaKnown RBP14.53□□□□□ -0.08
TREX1-201ENST00000433541 ZNF395Q9H8N7 513 aaPredicted RBP14.53□□□□□ -0.08
TREX1-201ENST00000433541 TEKT2Q9UIF3 430 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 PSME2Q9UL46 239 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 DLGAP4Q9Y2H0 992 aa14.53□□□□□ -0.08
TREX1-201ENST00000433541 HEMK1Q9Y5R4 338 aaPredicted RBP14.53□□□□□ -0.08
TREX1-201ENST00000433541 ATP6AP2A0A1C7CYW4 349 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 C1orf226A1L170 272 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 C17orf105B2RV13 164 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 TGFBR3LH3BV60 316 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 ATP6AP2O75787 350 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 PRB1P04280 392 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 IL3P08700 152 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 ALOX15P16050 662 aaPredicted RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 ARRB2P32121 409 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 RPL14P50914 215 aaKnown RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 SLC26A5P58743 744 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 TRA2BP62995 288 aaKnown RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 PPP2R2AP63151 447 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 HEPACAMQ14CZ8 416 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 ELAVL1Q15717 326 aaKnown RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 ATP6AP1LQ52LC2 224 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 JMJD6Q6NYC1 403 aaPredicted RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 PTRH1Q86Y79 214 aaKnown RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 TEX19Q8NA77 164 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 OR4K14Q8NGD5 310 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 OR14A16Q8NHC5 309 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 M1APQ8TC57 530 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 ANKRD9Q96BM1 317 aaPredicted RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 KLHL29Q96CT2 875 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 TUBGCP3Q96CW5 907 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 IMMP1LQ96LU5 166 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 BBC3Q96PG8 261 aaPredicted RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 WDR77Q9BQA1 342 aaPredicted RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 PELOQ9BRX2 385 aaKnown RBP14.52□□□□□ -0.09
TREX1-201ENST00000433541 SEMA4CQ9C0C4 833 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 OR8D2Q9GZM6 311 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 TUBB1Q9H4B7 451 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 MANSC1Q9H8J5 431 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 MIEF1Q9NQG6 463 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 GIMAP4Q9NUV9 329 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 C5AR2Q9P296 337 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 COPS7AQ9UBW8 275 aa14.52□□□□□ -0.09
TREX1-201ENST00000433541 CPAMD8Q8IZJ3 1885 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 TRBV11-1A0A0K0K1C0 115 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 A0A1W2PQ72 361 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 PGRMC2O15173 223 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 PEX11AO75192 247 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 CEACAM4O75871 244 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 GPR75O95800 540 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 KITP10721 976 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 RAE1P78406 368 aaKnown RBP14.51□□□□□ -0.09
TREX1-201ENST00000433541 C2orf80Q0P641 193 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 ABHD17BQ5VST6 288 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 CES4AQ5XG92 561 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 FCRLBQ6BAA4 426 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 NOXRED1Q6NXP6 359 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 ISLR2Q6UXK2 745 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 MMP21Q8N119 569 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 ZADH2Q8N4Q0 377 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 B3GNT7Q8NFL0 401 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 OR6Y1Q8NGX8 325 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 OR2T11Q8NH01 316 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 RAB3IL1Q8TBN0 382 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 LRRC8CQ8TDW0 803 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 C16orf78Q8WTQ4 265 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 UCN3Q969E3 161 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 PPWD1Q96BP3 646 aaKnown RBP14.51□□□□□ -0.09
TREX1-201ENST00000433541 TM4SF18Q96CE8 201 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 C19orf60Q96EN9 201 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 PPP3R2Q96LZ3 170 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 CNPPD1Q9BV87 410 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 ZNF552Q9H707 407 aaPredicted RBP14.51□□□□□ -0.09
TREX1-201ENST00000433541 THAP1Q9NVV9 213 aa14.51□□□□□ -0.09
TREX1-201ENST00000433541 ABI3Q9P2A4 366 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms