RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ZNF791Q3KP31 576 aaPredicted RBP16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 Q71RC1 249 aaPredicted RBP16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 BIVMQ86UB2 503 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 SNX31Q8N9S9 440 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 NAXEQ8NCW5 288 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 FAM13CQ8NE31 585 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 NEIL3Q8TAT5 605 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 ANKRD49Q8WVL7 239 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 SPACA9Q96E40 222 aaPredicted RBP16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 KCNC2Q96PR1 638 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 MAPKAP1Q9BPZ7 522 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 ROGDIQ9GZN7 287 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 SH2D2AQ9NP31 389 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 PRDM7Q9NQW5 492 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 DNAJC11Q9NVH1 559 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 WWOXQ9NZC7 414 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 GPRC5BQ9NZH0 403 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 PCDHGB3Q9Y5G1 929 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 PSAT1Q9Y617 370 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 SPACA6W5XKT8 324 aa16.86■□□□□ 0.29
UPK3BP1-201ENST00000428678 GOLGA6L10A0A0M3HER8 536 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 FAM95CA0A1B0GW59 222 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 LRRC3CA6NJW4 275 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 WNT3P56703 355 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 TAS2R39P59534 338 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 DEFB113Q30KQ7 82 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 FBXO48Q5FWF7 155 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 ADGRD1Q6QNK2 874 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 ZNF793Q6ZN11 406 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 C9orf40Q8IXQ3 194 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 LRRC25Q8N386 305 aaPredicted RBP16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 WFDC11Q8NEX6 87 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 TNIP2Q8NFZ5 429 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 NUBPLQ8TB37 319 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 PAQR8Q8TEZ7 354 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 ANKRD9Q96BM1 317 aaPredicted RBP16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 SENP5Q96HI0 755 aaPredicted RBP16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 DGAT2Q96PD7 388 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 SMR3AQ99954 134 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 EHD1Q9H4M9 534 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 ACKR4Q9NPB9 350 aa16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 ZNF490Q9ULM2 529 aaPredicted RBP16.85■□□□□ 0.29
UPK3BP1-201ENST00000428678 FN1P02751 2386 aaKnown RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 C15orf38-AP3S2A0A0A6YYH1 394 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 KDM4EB2RXH2 506 aaPredicted RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 RTCAO00442 366 aaKnown RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 DYRK3O43781 588 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 PRAMEF4O60810 478 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 LRATO95237 230 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 ATE1O95260 518 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 TBL3Q12788 808 aaKnown RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 DOC2AQ14183 400 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 DAZAP2Q15038 168 aaPredicted RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 FBXL19-AS1Q494R0 122 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 ACSF3Q4G176 576 aaPredicted RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 PRAMEF9Q5VWM5 478 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 MAATS1Q7Z4T9 603 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 UBE3DQ7Z6J8 389 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 ZC3HC1Q86WB0 502 aaKnown RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 OR4N5Q8IXE1 308 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 PDIK1LQ8N165 341 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 ACOT4Q8N9L9 421 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 SRFBP1Q8NEF9 429 aaKnown RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 PTCD3Q96EY7 689 aaKnown RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 TMEM79Q9BSE2 394 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 CNOT10Q9H9A5 744 aaKnown RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 QPCTLQ9NXS2 382 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 FOXD3Q9UJU5 478 aaPredicted RBP16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 JRKLQ9Y4A0 524 aa16.84■□□□□ 0.29
UPK3BP1-201ENST00000428678 TUBAL3A6NHL2 446 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 FGF17O60258 216 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 SH3BGRLO75368 114 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 CPN2P22792 545 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 ATP5A1P25705 553 aaKnown RBP16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 GDF1P27539 372 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 ADSLP30566 484 aaPredicted RBP16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 CEACAM8P31997 349 aaPredicted RBP16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 MSH2P43246 934 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 STT3AP46977 705 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 HSPA7P48741 367 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 TGFBIQ15582 683 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 STEAP4Q687X5 459 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 LYPD8Q6UX82 237 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 TCAIMQ8N3R3 496 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 SLC15A4Q8N697 577 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 OR10G3Q8NGC4 313 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 PPWD1Q96BP3 646 aaKnown RBP16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 VPS39Q96JC1 886 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 GAL3ST4Q96RP7 486 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 TBCDQ9BTW9 1192 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 DOHHQ9BU89 302 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 EFCAB11Q9BUY7 163 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 PROK2Q9HC23 129 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 CNIH4Q9P003 139 aa16.83■□□□□ 0.28
UPK3BP1-201ENST00000428678 AHRRA9YTQ3 701 aa16.82■□□□□ 0.28
UPK3BP1-201ENST00000428678 HRKO00198 91 aa16.82■□□□□ 0.28
UPK3BP1-201ENST00000428678 TAPBPO15533 448 aa16.82■□□□□ 0.28
UPK3BP1-201ENST00000428678 EPPINO95925 133 aa16.82■□□□□ 0.28
UPK3BP1-201ENST00000428678 IL2RAP01589 272 aa16.82■□□□□ 0.28
UPK3BP1-201ENST00000428678 IGKV3-11P04433 115 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms