RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ZNF451Q9Y4E5 1061 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF850A8MQ14 1090 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 J3KR12 359 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 CYB5BO43169 146 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 CNTN5O94779 1100 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 IL3P08700 152 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 GNAO1P09471 354 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 GCH1P30793 250 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 PTGIRP43119 386 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 MAGEA11P43364 429 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 KCNC1P48547 511 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 RPS15AP62244 130 aaKnown RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 TUBA3CQ13748 450 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 GAS6Q14393 721 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 PTCHD3Q3KNS1 767 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ATAD3CQ5T2N8 411 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 TXNRD3NBQ6F5E7 133 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 HMBOX1Q6NT76 420 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 REEP3Q6NUK4 255 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 XKRXQ6PP77 449 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 RNF130Q86XS8 419 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 CILP2Q8IUL8 1156 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF440Q8IYI8 595 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 OR9K2Q8NGE7 335 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 PYURFQ96I23 114 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 TREX2Q9BQ50 279 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 DERL2Q9GZP9 239 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 AKTIPQ9H8T0 292 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 SETD1AO15047 1707 aaKnown RBP8.59□□□□□ -1.04
CTNND1-208ENST00000428599 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.59□□□□□ -1.04
CTNND1-208ENST00000428599 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.59□□□□□ -1.04
CTNND1-208ENST00000428599 A0A1W2PP55 124 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 KLHL33A6NCF5 533 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 RTCAO00442 366 aaKnown RBP8.59□□□□□ -1.04
CTNND1-208ENST00000428599 NPC1O15118 1278 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 ASGR2P07307 311 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 SLC2A7Q6PXP3 512 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 SUSD1Q6UWL2 747 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 UBE2Q1Q7Z7E8 422 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 OR5J2Q8NH18 312 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 CCNL2Q96S94 520 aaPredicted RBP8.59□□□□□ -1.04
CTNND1-208ENST00000428599 TPT1P8Q9HAU6 139 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 CLEC4EQ9ULY5 219 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 TMEM14AQ9Y6G1 99 aa8.59□□□□□ -1.04
CTNND1-208ENST00000428599 UNC119BA6NIH7 251 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 A8MVJ9 347 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 SFTPBP07988 381 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 CTHP32929 405 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 PKDCCQ504Y2 493 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 ERI1Q8IV48 349 aaKnown RBP8.58□□□□□ -1.04
CTNND1-208ENST00000428599 FAM156AQ8NDB6 213 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 OR13C3Q8NGS6 347 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 SUN5Q8TC36 379 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 ASB12Q8WXK4 309 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 GPR62Q9BZJ7 368 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 SPHK2Q9NRA0 654 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 B4GALT6Q9UBX8 382 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 RPH3AQ9Y2J0 694 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-208ENST00000428599 PKD1L3Q7Z443 1732 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 BTAF1O14981 1849 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 A8MT66 165 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 LRRN3E7EW58 273 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 SLC19A2O60779 497 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 PRKD3O94806 890 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 RHOP08100 348 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 ATF4P18848 351 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-208ENST00000428599 AMY2BP19961 511 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 OGDHQ02218 1023 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 USF2Q15853 346 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-208ENST00000428599 CSNK1A1LQ8N752 337 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 CMASQ8NFW8 434 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-208ENST00000428599 TBC1D15Q8TC07 691 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 LRRC15Q8TF66 581 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 STON2Q8WXE9 905 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 DIO2Q92813 273 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 CD244Q9BZW8 370 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 LRRN3Q9H3W5 708 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 AMBNQ9NP70 447 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 COPZ2Q9P299 210 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 IL20RAQ9UHF4 553 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 FBXL3Q9UKT7 428 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 DLGAP4Q9Y2H0 992 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 TCHHQ07283 1943 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 ZNF860A6NHJ4 632 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 H7BY64 318 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 CNOT4O95628 575 aaKnown RBP8.58□□□□□ -1.04
CTNND1-208ENST00000428599 GSRP00390 522 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 CD72P21854 359 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 GLDCP23378 1020 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 RORAP35398 523 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 FRKP42685 505 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-208ENST00000428599 MLLT6P55198 1093 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-208ENST00000428599 MZT1Q08AG7 82 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 ZNF783Q6ZMS7 281 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 ZDHHC14Q8IZN3 488 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 ZNF610Q8N9Z0 462 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 PSD4Q8NDX1 1056 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 OR56A3Q8NH54 315 aa8.58□□□□□ -1.04
CTNND1-208ENST00000428599 PPP1R35Q8TAP8 253 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms