RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZNF791Q3KP31 576 aaPredicted RBP15.26■□□□□ 0.03
VARS-216ENST00000428445 C1orf185Q5T7R7 199 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 WLSQ5T9L3 541 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 C18orf63Q68DL7 685 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 OPN5Q6U736 354 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 LYPD8Q6UX82 237 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 SEM1Q6ZVN7 128 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 TCAIMQ8N3R3 496 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 GOLM1Q8NBJ4 401 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 ZNF473Q8WTR7 871 aaKnown RBP15.26■□□□□ 0.03
VARS-216ENST00000428445 UCN3Q969E3 161 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 SENP5Q96HI0 755 aaPredicted RBP15.26■□□□□ 0.03
VARS-216ENST00000428445 MS4A8Q9BY19 250 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 SLC6A15Q9H2J7 730 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 OR51B5Q9H339 312 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 EHD1Q9H4M9 534 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 LYRM4Q9HD34 91 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 CD274Q9NZQ7 290 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 PTBP2Q9UKA9 531 aaKnown RBP15.26■□□□□ 0.03
VARS-216ENST00000428445 SNX24Q9Y343 169 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 ACANP16112 2415 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 KIAA1549Q9HCM3 1950 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 SUSD5O60279 629 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 SEC31AO94979 1220 aaKnown RBP15.25■□□□□ 0.03
VARS-216ENST00000428445 SSTR1P30872 391 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 SLC12A2P55011 1212 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 IRF8Q02556 426 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 SERTAD2Q14140 314 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 CEBPEQ15744 281 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 PDK4Q16654 411 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 HYAL4Q2M3T9 481 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 SLC22A10Q63ZE4 541 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 SULT1C3Q6IMI6 304 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 CYS1Q717R9 158 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 ZBED8Q8IZ13 594 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 OR5L2Q8NGL0 311 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 OR8K3Q8NH51 312 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 WDR34Q96EX3 536 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 SGCZQ96LD1 299 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 JSRP1Q96MG2 331 aaPredicted RBP15.25■□□□□ 0.03
VARS-216ENST00000428445 KCNC2Q96PR1 638 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 POLDIP3Q9BY77 421 aaKnown RBP15.25■□□□□ 0.03
VARS-216ENST00000428445 GSX1Q9H4S2 264 aaPredicted RBP15.25■□□□□ 0.03
VARS-216ENST00000428445 CNOT10Q9H9A5 744 aaKnown RBP15.25■□□□□ 0.03
VARS-216ENST00000428445 SH2D2AQ9NP31 389 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 RNF14Q9UBS8 474 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 HRNRQ86YZ3 2850 aaPredicted RBP15.25■□□□□ 0.03
VARS-216ENST00000428445 NAV3Q8IVL0 2385 aa15.25■□□□□ 0.03
VARS-216ENST00000428445 E7ESA3 106 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 CCDC188H7C350 402 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 HIST1H1TP22492 207 aaPredicted RBP15.24■□□□□ 0.03
VARS-216ENST00000428445 RPL21P46778 160 aaKnown RBP15.24■□□□□ 0.03
VARS-216ENST00000428445 POU4F1Q01851 419 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 TGM3Q08188 693 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 SLAMF1Q13291 335 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 MPEG1Q2M385 716 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 TMEM64Q6YI46 380 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 NAXEQ8NCW5 288 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 SRFBP1Q8NEF9 429 aaKnown RBP15.24■□□□□ 0.03
VARS-216ENST00000428445 OR10G3Q8NGC4 313 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 KIAA1191Q96A73 305 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 SARAFQ96BY9 339 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 DGAT2Q96PD7 388 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 TBCDQ9BTW9 1192 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 RYDENQ9NUL5 291 aaKnown RBP15.24■□□□□ 0.03
VARS-216ENST00000428445 CRIM1Q9NZV1 1036 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 COPS7AQ9UBW8 275 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 PLEKHA6Q9Y2H5 1048 aa15.24■□□□□ 0.03
VARS-216ENST00000428445 ABCA4P78363 2273 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 NIPBLQ6KC79 2804 aaeCLIP15.23■□□□□ 0.03
VARS-216ENST00000428445 LRRC3CA6NJW4 275 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 WDR1O75083 606 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 FAM155BO75949 473 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 IGKV3-11P04433 115 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 HOXB4P17483 251 aaPredicted RBP15.23■□□□□ 0.03
VARS-216ENST00000428445 UQCRC1P31930 480 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 SSR2P43308 183 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 KIR2DL3P43628 341 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 STT3AP46977 705 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 KCNJ2P63252 427 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 FOLH1Q04609 750 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 DLG1Q12959 904 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 LAPTM5Q13571 262 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 DDX39BQ13838 428 aaKnown RBP15.23■□□□□ 0.03
VARS-216ENST00000428445 HIST2H2ACQ16777 129 aaPredicted RBP15.23■□□□□ 0.03
VARS-216ENST00000428445 AP5B1Q2VPB7 878 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 HIST2H2AA3Q6FI13 130 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 TGIF2LYQ8IUE0 185 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 CREG2Q8IUH2 290 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 RELL2Q8NC24 303 aaPredicted RBP15.23■□□□□ 0.03
VARS-216ENST00000428445 BBOF1Q8ND07 529 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 FAM13CQ8NE31 585 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 TSPAN17Q96FV3 270 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 GAL3ST4Q96RP7 486 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 KRT12Q99456 494 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 EFCAB11Q9BUY7 163 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 CD244Q9BZW8 370 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 ROGDIQ9GZN7 287 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 ZNF703Q9H7S9 590 aaPredicted RBP15.23■□□□□ 0.03
VARS-216ENST00000428445 ST6GALNAC2Q9UJ37 374 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms