RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RPS6KA6Q9UK32 745 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 PSME2Q9UL46 239 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 VPS13AQ96RL7 3174 aa14.36□□□□□ -0.11
ACTB-204ENST00000425660 TP53BP1Q12888 1972 aaPredicted RBP14.35□□□□□ -0.11
ACTB-204ENST00000425660 HRO43593 1189 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 B4GALT2O60909 372 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 GCM2O75603 506 aaPredicted RBP14.35□□□□□ -0.11
ACTB-204ENST00000425660 MAGEA8P43361 318 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 GABRA4P48169 554 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 NCBP2P52298 156 aaKnown RBP eCLIP14.35□□□□□ -0.115e-18■■□□□ 11.9
ACTB-204ENST00000425660 ELOAQ14241 798 aaKnown RBP14.35□□□□□ -0.11
ACTB-204ENST00000425660 ZNF630Q2M218 657 aaPredicted RBP14.35□□□□□ -0.11
ACTB-204ENST00000425660 PPP4R4Q6NUP7 873 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 KANSL1Q7Z3B3 1105 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 EPHX4Q8IUS5 362 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 MCATQ8IVS2 390 aaKnown RBP14.35□□□□□ -0.11
ACTB-204ENST00000425660 SAMD14Q8IZD0 417 aaPredicted RBP14.35□□□□□ -0.11
ACTB-204ENST00000425660 PACRGLQ8N7B6 248 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 ZDHHC12Q96GR4 267 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 BBS4Q96RK4 519 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 BDH2Q9BUT1 245 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 TMEM121BQ9BXQ6 578 aaPredicted RBP14.35□□□□□ -0.11
ACTB-204ENST00000425660 COQ10BQ9H8M1 238 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 C8orf4Q9NR00 106 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 ENAMQ9NRM1 1142 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 ZNF639Q9UID6 485 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 FBXO4Q9UKT5 387 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 ENTPD4Q9Y227 616 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 MAP4K5Q9Y4K4 846 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 TNRC6BQ9UPQ9 1833 aaKnown RBP14.35□□□□□ -0.11
ACTB-204ENST00000425660 TMEM131Q92545 1883 aa14.35□□□□□ -0.11
ACTB-204ENST00000425660 IGHV1OR21-1A0A087WYE8 117 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 CLOCKO15516 846 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 KIF1CO43896 1103 aaKnown RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 DEAF1O75398 565 aaPredicted RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 ERAL1O75616 437 aaKnown RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 SEMG1P04279 462 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 CKMT2P17540 419 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 CSNK2A2P19784 350 aaPredicted RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 EPHA8P29322 1005 aaPredicted RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 MPIP34949 423 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 CCT3P49368 545 aaKnown RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 GFERP55789 205 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 LRRC23Q53EV4 343 aaPredicted RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 FAM92BQ6ZTR7 304 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 CCDC80Q76M96 950 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 EIF3MQ7L2H7 374 aaKnown RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 PRSS41Q7RTY9 318 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 C6orf120Q7Z4R8 191 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 ZNF597Q96LX8 424 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 NPLQ9BXD5 320 aaPredicted RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 NTN4Q9HB63 628 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 SEMA3GQ9NS98 782 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 A0A1B0GTQ1 180 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 UPK1AO00322 258 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 ACOX3O15254 700 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 MT-ND1P03886 318 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 ARAFP10398 606 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 UQCRBP14927 111 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 CPN2P22792 545 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 TLX1P31314 330 aaPredicted RBP14.34□□□□□ -0.11
ACTB-204ENST00000425660 HOXD12P35452 270 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 HSPA13P48723 471 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 PRIM2P49643 509 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 GPLD1P80108 840 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 DUSP2Q05923 314 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 SCARB2Q14108 478 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 DEFB110Q30KQ9 67 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
ACTB-204ENST00000425660 TMTC4Q5T4D3 741 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 OR52E8Q6IFG1 317 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 CEACAM20Q6UY09 585 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 ZBTB49Q6ZSB9 765 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 FKBP9P1Q75LS8 142 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 SLC30A8Q8IWU4 369 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 TMEM105Q8N8V8 129 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 SFXN5Q8TD22 340 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 MOAP1Q96BY2 351 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 TGM7Q96PF1 710 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 SLC29A1Q99808 456 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 IL1RAPQ9NPH3 570 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 GIMAP4Q9NUV9 329 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 NLGN3Q9NZ94 848 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 PADI4Q9UM07 663 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 OAZ3Q9UMX2 235 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 NAALAD2Q9Y3Q0 740 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 ZNF780BQ9Y6R6 833 aa14.34□□□□□ -0.11
ACTB-204ENST00000425660 IGHV5-51A0A0C4DH38 117 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 TMEM221A6NGB7 291 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 TMEM229AB2RXF0 380 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 M0R296 226 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 CYR61O00622 381 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 DNAJB6O75190 326 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 CTSBP07858 339 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 RPSAP08865 295 aaKnown RBP14.33□□□□□ -0.12
ACTB-204ENST00000425660 ALDH4A1P30038 563 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 CASP9P55211 416 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 PCBP3P57721 371 aaKnown RBP14.33□□□□□ -0.12
ACTB-204ENST00000425660 DSTNP60981 165 aa14.33□□□□□ -0.12
ACTB-204ENST00000425660 CDK6Q00534 326 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms