RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 LRRC74AQ0VAA2 488 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 BCL7AQ4VC05 210 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 RPS26P11Q5JNZ5 115 aaPredicted RBP10.16□□□□□ -0.78
CUX1-205ENST00000425244 ZNF776Q68DI1 518 aaPredicted RBP10.16□□□□□ -0.78
CUX1-205ENST00000425244 FAM71E1Q6IPT2 247 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 TNFAIP8L2Q6P589 184 aaPredicted RBP10.16□□□□□ -0.78
CUX1-205ENST00000425244 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 TMIGD1Q6UXZ0 262 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 ZNF605Q86T29 641 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 LAS2Q8IYD9 372 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 NLGN4XQ8N0W4 816 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 PLA2G15Q8NCC3 412 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.16□□□□□ -0.786e-6■■■■■ 38.3
CUX1-205ENST00000425244 DYNC2LI1Q8TCX1 351 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 ITPAQ9BY32 194 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 ZBTB20Q9HC78 741 aaPredicted RBP10.16□□□□□ -0.78
CUX1-205ENST00000425244 MYNNQ9NPC7 610 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 C1GALT1Q9NS00 363 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 C5AR2Q9P296 337 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 DUSP12Q9UNI6 340 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 B3GNT3Q9Y2A9 372 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 NINQ8N4C6 2090 aa10.16□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3DA0A087WVF3 549 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3IA0A087WXS9 549 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3EA0A087X179 549 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3KA0A087X1G2 549 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TRBC2A0A5B9 178 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3FA6NER0 549 aaPredicted RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3LB9A6J9 549 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 FAM227AF5H4B4 570 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 KPNA4O00629 521 aaPredicted RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 AIREO43918 545 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 KLHL18O94889 574 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 STSP08842 583 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3HP0C7X1 549 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 CDH3P22223 829 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 SLC19A1P41440 591 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 RXRGP48443 463 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TIGD6Q17RP2 521 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 MICAQ29983 383 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ZNF658BQ4V348 819 aaPredicted RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 PRPF38BQ5VTL8 546 aaKnown RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3GQ6DHY5 549 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3CQ6IPX1 549 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 MAMSTRQ6ZN01 415 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 SZRD1Q7Z422 152 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TBC1D3Q8IZP1 549 aaPredicted RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 TAGAPQ8N103 731 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 METTL4Q8N3J2 472 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 STX19Q8N4C7 294 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 PHF10Q8WUB8 498 aaKnown RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 HMGB4Q8WW32 186 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 SIPA1Q96FS4 1042 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ALPK1Q96QP1 1244 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 C8orf33Q9H7E9 229 aaPredicted RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 FZD3Q9NPG1 666 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TAC3Q9UHF0 121 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 SLC6A14Q9UN76 642 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ANGPT4Q9Y264 503 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 CKAP5Q14008 2032 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TCRBV21S2A2A0A5A6 115 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 PSMD11O00231 422 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ACADMP11310 421 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ANXA8P13928 327 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ITGA2P17301 1181 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 C5AR1P21730 350 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TGFBR2P37173 567 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 RPL3P39023 403 aaKnown RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 DMPKQ09013 629 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 DNASE1L3Q13609 305 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ENPP2Q13822 863 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 PDE7AQ13946 482 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 UBXN2BQ14CS0 331 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TCEA2Q15560 299 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 DNAJC22Q8N4W6 341 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 OR4C15Q8NGM1 316 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 OR6Q1Q8NGQ2 317 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 GOT1L1Q8NHS2 421 aaPredicted RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 HCAR2Q8TDS4 363 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 GEMIN6Q8WXD5 167 aaKnown RBP10.15□□□□□ -0.78
CUX1-205ENST00000425244 S100ZQ8WXG8 99 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 GGHQ92820 318 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 MYDGFQ969H8 173 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 PIP5K1AQ99755 562 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 BCL7BQ9BQE9 202 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 CENPOQ9BU64 300 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ZDHHC5Q9C0B5 715 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ABCG4Q9H172 646 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 DCSTAMPQ9H295 470 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TAS2R16Q9NYV7 291 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 TAAR2Q9P1P5 351 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 PSORS1C1Q9UIG5 152 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 POFUT2Q9Y2G5 429 aa10.15□□□□□ -0.78
CUX1-205ENST00000425244 ANKDD1BA6NHY2 528 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 C5orf58C9J3I9 102 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SCAMP1O15126 338 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SLC31A1O15431 190 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 PI15O43692 258 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 DPM1O60762 260 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SERPINB7O75635 380 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms