RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 CLGNO14967 610 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 CLPSP04118 112 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 CCDC166P0CW27 439 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 CD99P14209 185 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 TNNI3P19429 210 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 HIST1H1TP22492 207 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 HPDP32754 393 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 GMPRP36959 345 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 STT3AP46977 705 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 MAN2A2P49641 1150 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 ARL4CP56559 192 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 PDIA2Q13087 525 aaKnown RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 MYBPHQ13203 477 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 RCN2Q14257 317 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 ZKSCAN8Q15776 578 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 PDK4Q16654 411 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 C1orf185Q5T7R7 199 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 RIPPLY2Q5TAB7 128 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 SLC22A10Q63ZE4 541 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 GPSM1Q86YR5 675 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 BBOF1Q8ND07 529 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 NINJ1Q92982 152 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 PPWD1Q96BP3 646 aaKnown RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 NTNG2Q96CW9 530 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 CD244Q9BZW8 370 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 ZNF703Q9H7S9 590 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 ACKR4Q9NPB9 350 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 DLL4Q9NR61 685 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 ACAD8Q9UKU7 415 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 CHCHD2Q9Y6H1 151 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 NAV3Q8IVL0 2385 aa13.8□□□□□ -0.2
ATG4B-209ENST00000425239 ANKHD1Q8IWZ3 2542 aaKnown RBP13.8□□□□□ -0.2
ATG4B-209ENST00000425239 TRGV5A0A0B4J1U4 118 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 WASHC1A8K0Z3 465 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 PHGDHO43175 533 aaKnown RBP13.79□□□□□ -0.2
ATG4B-209ENST00000425239 P04436 131 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 CHIT1Q13231 466 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 LAPTM5Q13571 262 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 SLC25A35Q3KQZ1 300 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 DEPDC1Q5TB30 811 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 CYS1Q717R9 158 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 ISCA2Q86U28 154 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 TGIF2LYQ8IUE0 185 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 RNF175Q8N4F7 328 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 RELL2Q8NC24 303 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-209ENST00000425239 NAXEQ8NCW5 288 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 SRFBP1Q8NEF9 429 aaKnown RBP13.79□□□□□ -0.2
ATG4B-209ENST00000425239 OR7G3Q8NG95 312 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 SARAFQ96BY9 339 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 SORBS1Q9BX66 1292 aaKnown RBP13.79□□□□□ -0.2
ATG4B-209ENST00000425239 ZNF717Q9BY31 904 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-209ENST00000425239 ROGDIQ9GZN7 287 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 CNOT10Q9H9A5 744 aaKnown RBP13.79□□□□□ -0.2
ATG4B-209ENST00000425239 COPS7BQ9H9Q2 264 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-209ENST00000425239 RASSF1Q9NS23 344 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 DNAJB12Q9NXW2 375 aaKnown RBP13.79□□□□□ -0.2
ATG4B-209ENST00000425239 NSMCE4AQ9NXX6 385 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 WWOXQ9NZC7 414 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 ST6GALNAC2Q9UJ37 374 aa13.79□□□□□ -0.2
ATG4B-209ENST00000425239 ABCA4P78363 2273 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 PROM1O43490 865 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 ZWINTO95229 277 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 TGFB1P01137 390 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 SSTR1P30872 391 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 CEACAM8P31997 349 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-209ENST00000425239 MSH2P43246 934 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 RPL21P46778 160 aaKnown RBP13.78□□□□□ -0.2
ATG4B-209ENST00000425239 ATP6V0D1P61421 351 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 DR1Q01658 176 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 TGM3Q08188 693 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 DLG1Q12959 904 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 TMEM35AQ53FP2 167 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 WLSQ5T9L3 541 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 OR4C11Q6IEV9 310 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 KLHL7Q8IXQ5 586 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 ZZZ3Q8IYH5 903 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 ULK2Q8IYT8 1036 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 SLC15A4Q8N697 577 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 MYRIPQ8NFW9 859 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 SPACA9Q96E40 222 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-209ENST00000425239 FBXL20Q96IG2 436 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 GPR22Q99680 433 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 ZFP64Q9NPA5 681 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 CRIM1Q9NZV1 1036 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 CNOT11Q9UKZ1 510 aaKnown RBP13.78□□□□□ -0.2
ATG4B-209ENST00000425239 RPH3AQ9Y2J0 694 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-209ENST00000425239 KIAA1549Q9HCM3 1950 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 MPDZO75970 2070 aa13.78□□□□□ -0.2
ATG4B-209ENST00000425239 SAP18O00422 153 aaKnown RBP13.77□□□□□ -0.21
ATG4B-209ENST00000425239 SH3BGRLO75368 114 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 TRIM3O75382 744 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-209ENST00000425239 FBXO45P0C2W1 286 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 GABRA1P14867 456 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 TCP1P17987 556 aaKnown RBP13.77□□□□□ -0.21
ATG4B-209ENST00000425239 SLC37A1P57057 533 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 IRF8Q02556 426 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 FOLH1Q04609 750 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms