RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 NR4A3Q92570 626 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 TANKQ92844 425 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 C11orf24Q96F05 449 aaPredicted RBP19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 UTP23Q9BRU9 249 aaKnown RBP19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 DEFB126Q9BYW3 111 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 BRF2Q9HAW0 419 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 TNFRSF12AQ9NP84 129 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 AGPAT4Q9NRZ5 378 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 MKS1Q9NXB0 559 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 MAP10Q9P2G4 905 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 LGALS13Q9UHV8 139 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 ANKUB1A6NFN9 424 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 ESPNB1AK53 854 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 C17orf105B2RV13 164 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 PGRMC2O15173 223 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 EDN3P14138 238 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 SOX18P35713 384 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 FOXA1P55317 472 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 STX4Q12846 297 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 COMMD6Q7Z4G1 85 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 BCORP1Q8N888 145 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 CDYL2Q8N8U2 506 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 HBEGFQ99075 208 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 CENPKQ9BS16 269 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 ELOVL6Q9H5J4 265 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 ABI3Q9P2A4 366 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 SVILO95425 2214 aa19.17■□□□□ 0.66
PKNOX1-202ENST00000418336 WIPF3A6NGB9 483 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 GLOD5A6NK44 160 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 UQCRHP07919 91 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 SP1P08047 785 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 KRT15P19012 456 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 KRT4P19013 534 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 ARL1P40616 181 aaPredicted RBP19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 HLCSP50747 726 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 DNAJB13P59910 316 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 LCP2Q13094 533 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 SGO1Q5FBB7 561 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 TTC19Q6DKK2 380 aaPredicted RBP19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 FAM180AQ6UWF9 173 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 GPRIN3Q6ZVF9 776 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 TRABD2AQ86V40 505 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 C4orf33Q8N1A6 199 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 THAP3Q8WTV1 239 aaPredicted RBP19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 DAZLQ92904 295 aaKnown RBP19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 PPWD1Q96BP3 646 aaKnown RBP19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 PSMG3-AS1Q96PY0 264 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 KCNA7Q96RP8 456 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 LIN28AQ9H9Z2 209 aaKnown RBP19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 OLAHQ9NV23 265 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 LRFN1Q9P244 771 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 CES1P1Q9UKY3 287 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 SNX6Q9UNH7 406 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 SPACA6W5XKT8 324 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 ZGRF1Q86YA3 2104 aa19.16■□□□□ 0.66
PKNOX1-202ENST00000418336 SERTM1A2A2V5 107 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 NME2P1O60361 137 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 ITGA10O75578 1167 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 RASAL1O95294 804 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 ESRRBO95718 433 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 GPR75O95800 540 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 IFNA16P05015 189 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 KLK1P06870 262 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 NR2F6P10588 404 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 NME2P22392 152 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 PKNOX1P55347 436 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 RAE1P78406 368 aaKnown RBP19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 ERCC6LQ2NKX8 1250 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 CCDC153Q494R4 210 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 SLC25A25Q6KCM7 469 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 EMBQ6PCB8 327 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 FRMD7Q6ZUT3 714 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 C9orf40Q8IXQ3 194 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 MMP21Q8N119 569 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 MREGQ8N565 214 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 BANPQ8N9N5 519 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 OR8K3Q8NH51 312 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 CHTF18Q8WVB6 975 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 SELENOMQ8WWX9 145 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 TM4SF18Q96CE8 201 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 FRMD6Q96NE9 622 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 ACPTQ9BZG2 426 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 OXSMQ9NWU1 459 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 MYOTQ9UBF9 498 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 ERRFI1Q9UJM3 462 aaPredicted RBP19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 RAB21Q9UL25 225 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 GRID1Q9ULK0 1009 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 SLC12A4Q9UP95 1085 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 CLCA3PQ9Y6N3 262 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 SPTAN1Q13813 2472 aaKnown RBP19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 DOPEY1Q5JWR5 2465 aa19.15■□□□□ 0.66
PKNOX1-202ENST00000418336 ZFAND5O76080 213 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 MLYCDO95822 493 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 MYL2P10916 166 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 HSD3B1P14060 373 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 ALOX15P16050 662 aaPredicted RBP19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 HSD3B2P26439 372 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 BUD31P41223 144 aaPredicted RBP19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 HK2P52789 917 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 RNF4P78317 190 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms