RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ALDH3A1P30838 453 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 GSTM5P46439 218 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 STT3AP46977 705 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 FOLH1Q04609 750 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 GALNT1Q10472 559 aaPredicted RBP13.74□□□□□ -0.21
CHD1-202ENST00000414220 C18orf63Q68DL7 685 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 CRLF3Q8IUI8 442 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 NUDCD3Q8IVD9 361 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 ST13P4Q8IZP2 240 aaPredicted RBP13.74□□□□□ -0.21
CHD1-202ENST00000414220 C1orf52Q8N6N3 182 aaKnown RBP13.74□□□□□ -0.21
CHD1-202ENST00000414220 OR5L2Q8NGL0 311 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 OR1N1Q8NGS0 311 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 NCLNQ969V3 563 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 ANKRD9Q96BM1 317 aaPredicted RBP13.74□□□□□ -0.21
CHD1-202ENST00000414220 HBEGFQ99075 208 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 GATA5Q9BWX5 397 aaPredicted RBP13.74□□□□□ -0.21
CHD1-202ENST00000414220 CDCP1Q9H5V8 836 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 SLC17A7Q9P2U7 560 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 MCM8Q9UJA3 840 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 VPS4AQ9UN37 437 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 PPIEQ9UNP9 301 aaKnown RBP13.74□□□□□ -0.21
CHD1-202ENST00000414220 COPG1Q9Y678 874 aaKnown RBP13.74□□□□□ -0.21
CHD1-202ENST00000414220 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 SPTA1P02549 2419 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 A0A1W2PR48 441 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 RGS14O43566 566 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 TYROBPO43914 113 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 FGF17O60258 216 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 SORBS2O94875 1100 aaKnown RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 ZWINTO95229 277 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 AIFM1O95831 613 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 WDPCPO95876 746 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 CD46P15529 392 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 MLLT10P55197 1068 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 IGLV3-21P80748 117 aaPredicted RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 ID2Q02363 134 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 OC90Q02509 493 aaPredicted RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 TBL3Q12788 808 aaKnown RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 HEPACAMQ14CZ8 416 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 INPP5JQ15735 1006 aaPredicted RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 TCHHL1Q5QJ38 904 aaPredicted RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 NDUFAF5Q5TEU4 345 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 HSDL2Q6YN16 418 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 CUZD1Q86UP6 607 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 EXOC3L1Q86VI1 746 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 OR4N5Q8IXE1 308 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 CLYBLQ8N0X4 340 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 NFAM1Q8NET5 270 aaPredicted RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 OR4K14Q8NGD5 310 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 CHTF18Q8WVB6 975 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 METTL2AQ96IZ6 378 aaKnown RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 PKNOX2Q96KN3 472 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 KCNA7Q96RP8 456 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 OR8D2Q9GZM6 311 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 RYDENQ9NUL5 291 aaKnown RBP13.73□□□□□ -0.21
CHD1-202ENST00000414220 PLA2G3Q9NZ20 509 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 LUZP4Q9P127 313 aa13.73□□□□□ -0.21
CHD1-202ENST00000414220 GABRR3A8MPY1 467 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 UBFD1O14562 309 aaKnown RBP13.72□□□□□ -0.21
CHD1-202ENST00000414220 BIRC5O15392 142 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 PCDH7O60245 1069 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 SNUPNO95149 360 aaKnown RBP13.72□□□□□ -0.21
CHD1-202ENST00000414220 BPGMP07738 259 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 SLC35E2P0CK97 266 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 DRD2P14416 443 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 GALNSP34059 522 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 CD97P48960 835 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 CYB561P49447 251 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 TNFSF10P50591 281 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 HMGCS1Q01581 520 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 BTKQ06187 659 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 INAQ16352 499 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 COLEC12Q5KU26 742 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 BEND6Q5SZJ8 279 aaPredicted RBP13.72□□□□□ -0.21
CHD1-202ENST00000414220 FCRLBQ6BAA4 426 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 RPUSD3Q6P087 351 aaKnown RBP13.72□□□□□ -0.21
CHD1-202ENST00000414220 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 SAMD14Q8IZD0 417 aaPredicted RBP13.72□□□□□ -0.21
CHD1-202ENST00000414220 KIRREL3Q8IZU9 778 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 BEST3Q8N1M1 668 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 TMEM156Q8N614 296 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 APCDD1LQ8NCL9 501 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 OR8K3Q8NH51 312 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 FAM76AQ8TAV0 307 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 PTPMT1Q8WUK0 201 aaPredicted RBP13.72□□□□□ -0.21
CHD1-202ENST00000414220 RIT1Q92963 219 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 TMEM125Q96AQ2 219 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 C5orf34Q96MH7 638 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 ACPTQ9BZG2 426 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 SHCBP1LQ9BZQ2 653 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 GIMAP4Q9NUV9 329 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 WBP11Q9Y2W2 641 aaKnown RBP13.72□□□□□ -0.21
CHD1-202ENST00000414220 PCDHA9Q9Y5H5 950 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 CLDN16Q9Y5I7 305 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 ZNF780BQ9Y6R6 833 aa13.72□□□□□ -0.21
CHD1-202ENST00000414220 MYOCOSA0A1B0GUC4 107 aa13.71□□□□□ -0.21
CHD1-202ENST00000414220 GLOD5A6NK44 160 aa13.71□□□□□ -0.21
CHD1-202ENST00000414220 TGFBR3LH3BV60 316 aa13.71□□□□□ -0.21
CHD1-202ENST00000414220 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.21
CHD1-202ENST00000414220 WISP1O95388 367 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms