RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 KRTCAP2Q8N6L1 136 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 OR52P1PQ8NH57 321 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 TMEM80Q96HE8 168 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 EHD1Q9H4M9 534 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 BRD7Q9NPI1 651 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 FEZF1A0PJY2 475 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 E7EQ34 232 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 ORC5O43913 435 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 PLEKHG7Q6ZR37 379 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 ARHGAP12Q8IWW6 846 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 ZSCAN4Q8NAM6 433 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-202ENST00000413872 OR8K5Q8NH50 307 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 MED28Q9H204 178 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 LAMP5Q9UJQ1 280 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 SRPK3Q9UPE1 567 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 CLUP10909 449 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 CLRN1P58418 232 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 CBLBQ13191 982 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 TUBA3CQ13748 450 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 PARS2Q7L3T8 475 aaKnown RBP16.53■□□□□ 0.24
PHRF1-202ENST00000413872 CDH24Q86UP0 819 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 TUBA8Q9NY65 449 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-202ENST00000413872 DKK3Q9UBP4 350 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 CH25HO95992 272 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 P2RY2P41231 377 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 GALK1P51570 392 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 CDHR3Q6ZTQ4 885 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 MFSD6LQ8IWD5 586 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 TOR1AIP2Q8NFQ8 470 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 OR2L3Q8NG85 312 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 OR52B6Q8NGF0 335 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 CD200R1Q8TD46 325 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 TCEAL4Q96EI5 215 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 TIMM29Q9BSF4 260 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 SYT11Q9BT88 431 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 CCDC106Q9BWC9 280 aa16.53■□□□□ 0.24
PHRF1-202ENST00000413872 SCO2O43819 266 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 CLCA4Q14CN2 919 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 DNAJA4Q8WW22 397 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-202ENST00000413872 NAT6Q93015 286 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 COMMD3Q9UBI1 195 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 PSMD9O00233 223 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 TBX1O43435 398 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 RPP14O95059 124 aaKnown RBP16.52■□□□□ 0.24
PHRF1-202ENST00000413872 ATP6AP1Q15904 470 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 SLC27A4Q6P1M0 643 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 TMEM107Q6UX40 140 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 METTL2AQ96IZ6 378 aaKnown RBP16.52■□□□□ 0.24
PHRF1-202ENST00000413872 ZFP3Q96NJ6 502 aa16.52■□□□□ 0.24
PHRF1-202ENST00000413872 A0A0J9YY10 115 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 H0YJX3 145 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 J3QLW9 94 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 DIRAS1O95057 198 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 OXSR1O95747 527 aaPredicted RBP16.52■□□□□ 0.23
PHRF1-202ENST00000413872 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF19P17023 458 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 NSDHLQ15738 373 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 SLC36A3Q495N2 470 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 RNF220Q5VTB9 566 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF765Q7L2R6 523 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 CCDC36Q8IYA8 594 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF101Q8IZC7 436 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 GPR26Q8NDV2 337 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 CAPSLQ8WWF8 208 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 MEMO1Q9Y316 297 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 PRAMEF2O60811 474 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 CHRM5P08912 532 aaPredicted RBP16.52■□□□□ 0.23
PHRF1-202ENST00000413872 TYSND1Q2T9J0 566 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 HSF5Q4G112 596 aaPredicted RBP16.52■□□□□ 0.23
PHRF1-202ENST00000413872 CLIP4Q8N3C7 705 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 RHBDF1Q96CC6 855 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 TOE1Q96GM8 510 aaKnown RBP16.52■□□□□ 0.23
PHRF1-202ENST00000413872 SLC39A13Q96H72 371 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 TM9SF2Q99805 663 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 TTYH1Q9H313 450 aaPredicted RBP16.52■□□□□ 0.23
PHRF1-202ENST00000413872 DNMT3BQ9UBC3 853 aaKnown RBP16.52■□□□□ 0.23
PHRF1-202ENST00000413872 TMEM14AQ9Y6G1 99 aa16.52■□□□□ 0.23
PHRF1-202ENST00000413872 LOC285095A0A1B0GVY8 99 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 TEX46H3BTG2 121 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 POLR1CO15160 346 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-202ENST00000413872 C7P10643 843 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 TIMP2P16035 220 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 AZGP1P25311 298 aaKnown RBP16.51■□□□□ 0.23
PHRF1-202ENST00000413872 CDK3Q00526 305 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 SLITRK4Q8IW52 837 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 OR2T33Q8NG76 320 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 C16orf78Q8WTQ4 265 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 B3GNT4Q9C0J1 378 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 DNAJC15Q9Y5T4 150 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 GFRA2O00451 464 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 P04436 131 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 RHCEP18577 417 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 CD6P30203 668 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ADAM17P78536 824 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 GRIN2CQ14957 1233 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 SWI5Q1ZZU3 235 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 ZBED5Q49AG3 693 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 PKDCCQ504Y2 493 aa16.51■□□□□ 0.23
PHRF1-202ENST00000413872 PNCKQ6P2M8 343 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms