RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 GGT1P19440 569 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 CLDN8P56748 225 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 MCCD1P59942 119 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 LASP1Q14847 261 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 CCDC58Q4VC31 144 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 PRSS58Q8IYP2 241 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 MFSD2AQ8NA29 543 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 FANK1Q8TC84 345 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 NXPE2Q96DL1 559 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 GPRC5BQ9NZH0 403 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 KCNK6Q9Y257 313 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 SMIM30A4D0T7 59 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 LRRN3E7EW58 273 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 VEGFDO43915 354 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 OR12D2P58182 307 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 RAB8AP61006 207 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 OR4D1Q15615 310 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 RPL13AP3Q6NVV1 102 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 SUSD1Q6UWL2 747 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 OR4K1Q8NGD4 311 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 LILRB4Q8NHJ6 448 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 JSRP1Q96MG2 331 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 CCDC32Q9BV29 185 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 MKRN2Q9H000 416 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 LRRN3Q9H3W5 708 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ZCWPW2A0A1B0GU75 182 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF840PA6NDX5 716 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 VNN2O95498 520 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 PIM1P11309 404 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 HOXD8P13378 290 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 RCAN2Q14206 197 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 PSAPL1Q6NUJ1 521 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ERN2Q76MJ5 926 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 CARM1Q86X55 608 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 MCHR1Q99705 422 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 PPA2Q9H2U2 334 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 IGSF5Q9NSI5 407 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 BACE2Q9Y5Z0 518 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 G3V2L1 256 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 TSPAN6O43657 245 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF821O75541 412 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 TOXO94900 526 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 GKP32189 559 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 KDELR2P33947 212 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 CTSOP43234 321 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 RGS6P49758 472 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 NPWQ8N729 165 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 OR6C4Q8NGE1 309 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 SPHK2Q9NRA0 654 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 TVP23AA6NH52 213 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 CH25HO95992 272 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 CCL5P13501 91 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 CTBP2P56545 445 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ST3GAL4Q11206 333 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 SDHAF3Q9NRP4 125 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 NPIPA5E9PKD4 350 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 SGCEO43556 437 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 OAZ2O95190 189 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 HTR1AP08908 422 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 GNSP15586 552 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 MYF6P23409 242 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 VAMP1P23763 118 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ETV3P41162 512 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 SUOXP51687 545 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF33BQ06732 778 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 GINS1Q14691 196 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 LAPTM4AQ15012 233 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 SEC23BQ15437 767 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 EXOC3L2Q2M3D2 409 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 PNCKQ6P2M8 343 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 MTFR2Q6P444 385 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 KCTD9Q7L273 389 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 OR4K14Q8NGD5 310 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 MFSD8Q8NHS3 518 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 CNIH3Q8TBE1 160 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 B3GNT4Q9C0J1 378 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ARL6Q9H0F7 186 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 RHCGQ9UBD6 479 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 NPIPA1Q9UND3 350 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 PLEKHA6Q9Y2H5 1048 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 HIF3AQ9Y2N7 669 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 C8orf89P0DMQ9 161 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 CHRNB1P11230 501 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 RAB3BP20337 219 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 PPP5CP53041 499 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 NFATC3Q12968 1075 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF550Q7Z398 422 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 GRASPQ7Z6J2 395 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 GKN2Q86XP6 184 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 FAM83CQ9BQN1 747 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 GNG8Q9UK08 70 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 ERVK-19Q9WJR5 959 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms