RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 Q8N402 240 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 PROKR2Q8NFJ6 384 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 LRRC20Q8TCA0 184 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 NELL2Q99435 816 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 RETREG1Q9H6L5 497 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 FZD3Q9NPG1 666 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ACER3Q9NUN7 267 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 CRLS1Q9UJA2 301 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 CLCA3PQ9Y6N3 262 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 PLXNA4Q9HCM2 1894 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 PDE4DIPQ5VU43 2346 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 WASHC1A8K0Z3 465 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 SMLR1H3BR10 107 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ORC5O43913 435 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 TSC22D2O75157 780 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 CKMP06732 381 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ALPIP09923 528 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 SRCP12931 536 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ELOAQ14241 798 aaKnown RBP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 GANABQ14697 944 aaKnown RBP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ANXA8L1Q5VT79 327 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 C22orf42Q6IC83 251 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 GLCCI1Q86VQ1 547 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 RNF175Q8N4F7 328 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 NANOGP1Q8N7R0 232 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 DUSP18Q8NEJ0 188 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 OR8H1Q8NGG4 311 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 DNAJA4Q8WW22 397 aaPredicted RBP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 HCFC1R1Q9NWW0 138 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 GLTPQ9NZD2 209 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 DNAJC27Q9NZQ0 273 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ZNF282Q9UDV7 671 aaPredicted RBP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 RUVBL1Q9Y265 456 aaKnown RBP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 RPL36Q9Y3U8 105 aaKnown RBP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 TRAV19A0A0A6YYK7 116 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 TNFRSF21O75509 655 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 GASTP01350 101 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 HLA-DQB1P01920 261 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 HIST1H2AGP0C0S8 130 aaPredicted RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CLEC2LP0C7M8 214 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 MSL3P1P0C860 447 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 HIST1H2ADP20671 130 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 SDC2P34741 201 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 IRS1P35568 1242 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 XCR1P46094 333 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 C21orf58P58505 322 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 SNRPGP62308 76 aaKnown RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 TAGLNQ01995 201 aaKnown RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 ACSM2AQ08AH3 577 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CAMK1Q14012 370 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 ZBTB37Q5TC79 503 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 ACSM2BQ68CK6 577 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 LAS2Q8IYD9 372 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 SKA2Q8WVK7 121 aaPredicted RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 HIST1H2AHQ96KK5 128 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 KCTD7Q96MP8 289 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 HIST1H2AJQ99878 128 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 H2AFJQ9BTM1 129 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 RERGLQ9H628 205 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 KCTD5Q9NXV2 234 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 NLKQ9UBE8 527 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 VPS29Q9UBQ0 182 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 SNX11Q9Y5W9 270 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 SERTM1A2A2V5 107 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 ARRDC5A6NEK1 342 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 PRAMEF25A6NGN4 478 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 GRXCR1A8MXD5 290 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 GAPDHSO14556 408 aaPredicted RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CBSLP0DN79 551 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CBSP35520 551 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CCR2P41597 374 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 LIMS1P48059 325 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 DGKEP52429 567 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CLDN20P56880 219 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 SCARB2Q14108 478 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CYP27C1Q4G0S4 372 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 LYPLAL1Q5VWZ2 237 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 FAM205BPQ63HN1 556 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CXorf57Q6NSI4 855 aaKnown RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 NCEH1Q6PIU2 408 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 UBE2R2Q712K3 238 aaPredicted RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CHST9Q7L1S5 443 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 OR4A15Q8NGL6 344 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 NACC2Q96BF6 587 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 UPRTQ96BW1 309 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 AP2M1Q96CW1 435 aa14.72□□□□□ -0.05
LIMS2-205ENST00000409455 GFM1Q96RP9 751 aaKnown RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 NMNAT1Q9HAN9 279 aaPredicted RBP14.72□□□□□ -0.05
LIMS2-205ENST00000409455 CHD9Q3L8U1 2897 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 LYRM1O43325 122 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 TBL1XO60907 577 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 ETFAP13804 333 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 ARSBP15848 533 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 INPP1P49441 399 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 MAN2A2P49641 1150 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 HMGA2P52926 109 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 CASP9P55211 416 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 ZNF628Q5EBL2 1059 aa14.71□□□□□ -0.05
LIMS2-205ENST00000409455 GCNT6Q5T4J0 391 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms