RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CDKN3Q16667 212 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 IFI44LQ53G44 452 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 SPANXN2Q5MJ10 180 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 GCNT6Q5T4J0 391 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 RSBN1Q5VWQ0 802 aaPredicted RBP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 STEAP3Q658P3 488 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 TRIM48Q8IWZ4 208 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 GGHQ92820 318 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 CNPPD1Q9BV87 410 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 SLIRPQ9GZT3 109 aaKnown RBP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 PLXNA3P51805 1871 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 GPR179Q6PRD1 2367 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 CHD9Q3L8U1 2897 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 TRIM64BA6NI03 449 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 NOTOA8MTQ0 251 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 NDUFS4O43181 175 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 RPLP0P05388 317 aaKnown RBP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 MAGEA2P43356 314 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 KCNJ10P78508 379 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 SRSF5Q13243 272 aaKnown RBP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 SMU1Q2TAY7 513 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 TANGO2Q6ICL3 276 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 AKAP14Q86UN6 197 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 L3MBTL4Q8NA19 623 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 APH1BQ8WW43 257 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 IPCEF1Q8WWN9 437 aaPredicted RBP12.76□□□□□ -0.37
COL6A2-204ENST00000409416 RSPRY1Q96DX4 576 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 ZSCAN5AQ9BUG6 496 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 SLC6A16Q9GZN6 736 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 FBXL12Q9NXK8 326 aa12.76□□□□□ -0.37
COL6A2-204ENST00000409416 ADAMDEC1O15204 470 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 ASNA1O43681 348 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 NARSO43776 548 aaKnown RBP12.75□□□□□ -0.37
COL6A2-204ENST00000409416 MED26O95402 600 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 GRK5P34947 590 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 SLC6A12P48065 614 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 TGM4P49221 684 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 DEFB110Q30KQ9 67 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 SNAP47Q5SQN1 464 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 DEPDC1Q5TB30 811 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 SLC5A11Q8WWX8 675 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 ATL1Q8WXF7 558 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 LMLNQ96KR4 655 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 ZBP1Q9H171 429 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 ADAP2Q9NPF8 381 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 ASIC5Q9NY37 505 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 NDUFAF4Q9P032 175 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 SERGEFQ9UGK8 458 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 COL4A6Q14031 1691 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
COL6A2-204ENST00000409416 JUNDP17535 347 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 PSMA3P25788 255 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 PPP5CP53041 499 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 AP1S2P56377 157 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 FAM78AQ5JUQ0 283 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 SLC35F1Q5T1Q4 408 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 IQCHQ86VS3 1027 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 RHOXF1Q8NHV9 184 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 OR5M11Q96RB7 305 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 PRRG3Q9BZD7 231 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 MBNL1Q9NR56 388 aaKnown RBP12.75□□□□□ -0.37
COL6A2-204ENST00000409416 TEX10Q9NXF1 929 aaPredicted RBP12.75□□□□□ -0.37
COL6A2-204ENST00000409416 ITGB1BP2Q9UKP3 347 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 NUAK1O60285 661 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 DNAJB5O75953 348 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 APOA1P02647 267 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 ADRB3P13945 408 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 SPNP16150 400 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 NCBP2P52298 156 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL6A2-204ENST00000409416 ENPP7Q6UWV6 458 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 TMC8Q8IU68 726 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 PEX5LQ8IYB4 626 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 SIAEQ9HAT2 523 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 N6AMT1Q9Y5N5 214 aa12.75□□□□□ -0.37
COL6A2-204ENST00000409416 MFN2O95140 757 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 TIMP1P01033 207 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 PRNPP04156 253 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 PVRP15151 417 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 KCNJ8Q15842 424 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 DUSP7Q16829 419 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 ANXA8L1Q5VT79 327 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 DESI1Q6ICB0 168 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 Q6ZNB5 142 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 SFTPA2Q8IWL1 248 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 OR9A1PQ8NGU1 263 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 PATE1Q8WXA2 126 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 VMP1Q96GC9 406 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 ZCCHC2Q9C0B9 1178 aaKnown RBP12.74□□□□□ -0.37
COL6A2-204ENST00000409416 CD93Q9NPY3 652 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 TBC1D14Q9P2M4 693 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 TBX21Q9UL17 535 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 NOTCH4Q99466 2003 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 A0A1B0GVC2 190 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 A6NIN4 97 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 CLCA1A8K7I4 914 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 LOC110117498-PIK3R3F6TDL0 507 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 M0R082 166 aa12.74□□□□□ -0.37
COL6A2-204ENST00000409416 SOX30O94993 753 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms