RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CLIP3Q96DZ5 547 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 LIN37Q96GY3 246 aaPredicted RBP15.85■□□□□ 0.13
SSB-202ENST00000409333 CCDC115Q96NT0 180 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 PANX1Q96RD7 426 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 ZNF304Q9HCX3 659 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 GID8Q9NWU2 228 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 SLC39A1Q9NY26 324 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 SLC25A37Q9NYZ2 338 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 VAPAQ9P0L0 249 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 CROTQ9UKG9 612 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 CDC14AQ9UNH5 594 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 A0A096LPI6 279 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 A0A1W2PRB8 838 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 GSC2O15499 205 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 GFRA3O60609 400 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 CDC123O75794 336 aaPredicted RBP15.85■□□□□ 0.13
SSB-202ENST00000409333 ABCB1P08183 1280 aaPredicted RBP15.85■□□□□ 0.13
SSB-202ENST00000409333 CDK4P11802 303 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 ZNF28P17035 718 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 HOXB9P17482 250 aaPredicted RBP15.85■□□□□ 0.13
SSB-202ENST00000409333 FBLP22087 321 aaKnown RBP15.85■□□□□ 0.13
SSB-202ENST00000409333 PTGER1P34995 402 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 KCNJ2P63252 427 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 HBA1P69905 142 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 ID2Q02363 134 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 DSG2Q14126 1118 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.85■□□□□ 0.13
SSB-202ENST00000409333 DNAL1Q4LDG9 190 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 LRIF1Q5T3J3 769 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 ARHGAP40Q5TG30 622 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 OR4A15Q8NGL6 344 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 COL26A1Q96A83 441 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 GBP5Q96PP8 586 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 GPATCH1Q9BRR8 931 aaKnown RBP15.85■□□□□ 0.13
SSB-202ENST00000409333 YIPF2Q9BWQ6 316 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 CLK4Q9HAZ1 481 aaKnown RBP15.85■□□□□ 0.13
SSB-202ENST00000409333 NDE1Q9NXR1 346 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 MAP4K5Q9Y4K4 846 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 PCDHB14Q9Y5E9 798 aa15.85■□□□□ 0.13
SSB-202ENST00000409333 A0A1W2PNU3 283 aaPredicted RBP15.84■□□□□ 0.13
SSB-202ENST00000409333 FGF17O60258 216 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 JRKO75564 520 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 DNAJC8O75937 253 aaPredicted RBP15.84■□□□□ 0.13
SSB-202ENST00000409333 DDX5P17844 614 aaKnown RBP15.84■□□□□ 0.13
SSB-202ENST00000409333 FEN1P39748 380 aaKnown RBP15.84■□□□□ 0.13
SSB-202ENST00000409333 MAPK10P53779 464 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 FOLH1Q04609 750 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 COX15Q7KZN9 410 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 ZNF551Q7Z340 670 aaPredicted RBP15.84■□□□□ 0.13
SSB-202ENST00000409333 SUN3Q8TAQ9 357 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 TBC1D20Q96BZ9 403 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 CLPTM1LQ96KA5 538 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 ZNF681Q96N22 645 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 PRDM9Q9NQV7 894 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 TRPC4Q9UBN4 977 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 ENTPD4Q9Y227 616 aa15.84■□□□□ 0.13
SSB-202ENST00000409333 TRBV5-3A0A0A0MS03 114 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 OR2W5A6NFC9 320 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 MYO1GB0I1T2 1018 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 B4GALT2O60909 372 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 CPNE3O75131 537 aaKnown RBP15.83■□□□□ 0.12
SSB-202ENST00000409333 ERN1O75460 977 aaKnown RBP15.83■□□□□ 0.12
SSB-202ENST00000409333 ANP32DO95626 131 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 NPPAP01160 153 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 C1QCP02747 245 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 FHP07954 510 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 SLC6A2P23975 617 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 NTSP30990 170 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 MANFP55145 182 aaKnown RBP15.83■□□□□ 0.12
SSB-202ENST00000409333 HSPB3Q12988 150 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 GAB1Q13480 694 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 CEBPEQ15744 281 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 ZNF385CQ66K41 422 aaPredicted RBP15.83■□□□□ 0.12
SSB-202ENST00000409333 CLEC4FQ8N1N0 589 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 OR4K14Q8NGD5 310 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 ADAMTS18Q8TE60 1221 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 UTP4Q969X6 686 aaKnown RBP15.83■□□□□ 0.12
SSB-202ENST00000409333 ZBED6CLQ96FA7 236 aaPredicted RBP15.83■□□□□ 0.12
SSB-202ENST00000409333 AURKBQ96GD4 344 aaPredicted RBP15.83■□□□□ 0.12
SSB-202ENST00000409333 AMDHD1Q96NU7 426 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 BBS4Q96RK4 519 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 CGREF1Q99674 301 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 THTPAQ9BU02 230 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 GLIPR2Q9H4G4 154 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 SLC22A11Q9NSA0 550 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 PISDQ9UG56 409 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 PACSIN3Q9UKS6 424 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 B3GALT1Q9Y5Z6 326 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 ZNF780BQ9Y6R6 833 aa15.83■□□□□ 0.12
SSB-202ENST00000409333 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.83■□□□□ 0.12
SSB-202ENST00000409333 CCDC187A0A096LP49 1063 aa15.82■□□□□ 0.12
SSB-202ENST00000409333 MYOCOSA0A1B0GUC4 107 aa15.82■□□□□ 0.12
SSB-202ENST00000409333 HBQ1P09105 142 aa15.82■□□□□ 0.12
SSB-202ENST00000409333 CEACAM1P13688 526 aa15.82■□□□□ 0.12
SSB-202ENST00000409333 RORAP35398 523 aa15.82■□□□□ 0.12
SSB-202ENST00000409333 TRPC1P48995 793 aa15.82■□□□□ 0.12
SSB-202ENST00000409333 NOVA1P51513 510 aaKnown RBP15.82■□□□□ 0.12
SSB-202ENST00000409333 NCBP2P52298 156 aaKnown RBP eCLIP15.82■□□□□ 0.12
SSB-202ENST00000409333 ABHD18Q0P651 414 aa15.82■□□□□ 0.12
SSB-202ENST00000409333 LRRC74AQ0VAA2 488 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms