RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 RNF167Q9H6Y7 350 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 NECTIN3Q9NQS3 549 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 SLC9A8Q9Y2E8 581 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 ANAPC1Q9H1A4 1944 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 EFCAB10A6NFE3 127 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 M0R3H8 397 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 TLR4O00206 839 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 PPM1DO15297 605 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 GABARAPO95166 117 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 GTF2E2P29084 291 aaKnown RBP11.33□□□□□ -0.6
PCNX4-204ENST00000406949 P2RY2P41231 377 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 XKP51811 444 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 PIN1Q13526 163 aaPredicted RBP11.33□□□□□ -0.6
PCNX4-204ENST00000406949 C1DQ13901 141 aaKnown RBP11.33□□□□□ -0.6
PCNX4-204ENST00000406949 CCDC116Q8IYX3 515 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 ZNF614Q8N883 585 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 GGHQ92820 318 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 TMEM203Q969S6 136 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 CXorf40BQ96DE9 158 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 CNDP2Q96KP4 475 aaKnown RBP11.33□□□□□ -0.6
PCNX4-204ENST00000406949 TEX10Q9NXF1 929 aaPredicted RBP11.33□□□□□ -0.6
PCNX4-204ENST00000406949 TAAR2Q9P1P5 351 aa11.33□□□□□ -0.6
PCNX4-204ENST00000406949 PSMD11O00231 422 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 PLPP1O14494 284 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 VEGFDO43915 354 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 DNAJB5O75953 348 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 DNTTP04053 509 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 HNRNPA1P09651 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 GSTM5P46439 218 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 CSNK2BP67870 215 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 KCNC4Q03721 635 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 GPM6BQ13491 265 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 FAM71E1Q6IPT2 247 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 PDZD3Q86UT5 571 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 ZNF547Q8IVP9 402 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 B3GNT7Q8NFL0 401 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 OR8K5Q8NH50 307 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 FGF13Q92913 245 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 HRASLS5Q96KN8 279 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 COQ10AQ96MF6 247 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 RC3H2Q9HBD1 1191 aaKnown RBP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 ATP6V1HQ9UI12 483 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 IRAK3Q9Y616 596 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 TRBV4-1A0A0J9YWV2 114 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 TRIM64A6NGJ6 449 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 WBP4O75554 376 aaKnown RBP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 BMP4P12644 408 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 PCMT1P22061 227 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 CLEC12AQ5QGZ9 265 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 C16orf62Q7Z3J2 963 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 RBM45Q8IUH3 476 aaKnown RBP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 OR10G6Q8NH81 332 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 ZCCHC10Q8TBK6 192 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 UCK2Q9BZX2 261 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 MRPS30Q9NP92 439 aaKnown RBP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 PADI2Q9Y2J8 665 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 ALPK2Q86TB3 2170 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 C1orf226A1L170 272 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 FOXE1O00358 373 aaPredicted RBP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 ZW10O43264 779 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 TLX2O43763 284 aaPredicted RBP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 PTHP01270 115 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 GASTP01350 101 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 IGFBP1P08833 259 aaPredicted RBP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 PIK3CBP42338 1070 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 SLC16A1P53985 500 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 CXCR4P61073 352 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 SNAPC1Q16533 368 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 SYPL1Q16563 259 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 TPRG1LQ5T0D9 272 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 CPA6Q8N4T0 437 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 SLC38A5Q8WUX1 472 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 PPP1R14BQ96C90 147 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 DSN1Q9H410 356 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 CLCA2Q9UQC9 943 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 RBMX2Q9Y388 322 aaKnown RBP11.32□□□□□ -0.6
PCNX4-204ENST00000406949 N6AMT1Q9Y5N5 214 aa11.32□□□□□ -0.6
PCNX4-204ENST00000406949 OTOL1A6NHN0 477 aaPredicted RBP11.31□□□□□ -0.6
PCNX4-204ENST00000406949 KAT7O95251 611 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 CA3P07451 260 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 RHCEP18577 417 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
PCNX4-204ENST00000406949 CRISP1P54107 249 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 TAS2R41P59536 307 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 OLR1P78380 273 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 CDK3Q00526 305 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 LRRC32Q14392 662 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 PRSS36Q5K4E3 855 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 USP43Q70EL4 1123 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 BCDIN3DQ7Z5W3 292 aaKnown RBP11.31□□□□□ -0.6
PCNX4-204ENST00000406949 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
PCNX4-204ENST00000406949 DNAJC22Q8N4W6 341 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 OR5P2Q8WZ92 322 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 SLC9A6Q92581 669 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 SMARCD2Q92925 531 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 RSPRY1Q96DX4 576 aa11.31□□□□□ -0.6
PCNX4-204ENST00000406949 METTL2AQ96IZ6 378 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms