RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 NTMT1Q9BV86 223 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 FAIM2Q9BWQ8 316 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ARHGAP39Q9C0H5 1083 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ARL6Q9H0F7 186 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 LRRN3Q9H3W5 708 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SLC28A3Q9HAS3 691 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ZCCHC3Q9NUD5 404 aaKnown RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 FBXL12Q9NXK8 326 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 MGAT4CQ9UBM8 478 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PADI3Q9ULW8 664 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 A0A1B0GVC2 190 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 A6NIN4 97 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 OR6C75A6NL08 312 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 FAM170BA6NMN3 283 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 KDELR3O43731 214 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 RPLP2P05387 115 aaKnown RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 IL1RNP18510 177 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 OMPP47874 163 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 FNTBP49356 437 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 VSX2P58304 361 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 TAF1CQ15572 869 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 COL28A1Q2UY09 1125 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 LEXMQ3ZCV2 418 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 RAB41Q5JT25 222 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SLC38A6Q8IZM9 456 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SLC43A3Q8NBI5 491 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 BEST4Q8NFU0 473 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ACOT12Q8WYK0 555 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 COL26A1Q96A83 441 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SLC35G5Q96KT7 338 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 GABARAPL1Q9H0R8 117 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 TRIM36Q9NQ86 728 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 TXNL4BQ9NX01 149 aaKnown RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 TBC1D24Q9ULP9 559 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CNTRLQ7Z7A1 2325 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 C2orf92A0A1B0GVN3 265 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SCAMP2O15127 329 aaKnown RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CACNG3O60359 315 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ITGBL1O95965 494 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 HMGN1P05114 100 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 PRR35P0CG20 571 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 JUPP14923 745 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 RIPPLY1Q0D2K3 151 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF791Q3KP31 576 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF311Q5JNZ3 666 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CDKL4Q5MAI5 379 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 C9orf64Q5T6V5 341 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 AGTRAPQ6RW13 159 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CFAP77Q6ZQR2 320 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 GPR142Q7Z601 462 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SCD5Q86SK9 330 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 KLBQ86Z14 1044 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 GJD3Q8N144 294 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 LINC00471Q8N535 108 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 MDGA1Q8NFP4 955 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 OR51G2Q8NGK0 314 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM40Q8WWA1 233 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 TRIB3Q96RU7 358 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 THAP7Q9BT49 309 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 NANSQ9NR45 359 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 RNF181Q9P0P0 153 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CLEC2DQ9UHP7 191 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ASB4Q9Y574 426 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 I6L893 689 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 J3KTA2 159 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 DSCR3O14972 297 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SAGP10523 405 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 TIA1P31483 386 aaKnown RBP eCLIP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SSR2P43308 183 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CENPAP49450 140 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CRISP3P54108 245 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 LRRC32Q14392 662 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 LRRC73Q5JTD7 316 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CTSL3PQ5NE16 218 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 OR2G6Q5TZ20 316 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SAXO2Q658L1 398 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 FAM198BQ6UWH4 519 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF782Q6ZMW2 699 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 OR52N2Q8NGI0 321 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 RAD51AP1Q96B01 352 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ZBED6CLQ96FA7 236 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ACTR6Q9GZN1 396 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 SRRQ9GZT4 340 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 GKN1Q9NS71 199 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 MARK1Q9P0L2 795 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 COPZ2Q9P299 210 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 ASF1AQ9Y294 204 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 GPR52Q9Y2T5 361 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 PCDHGB7Q9Y5F8 929 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 CACNG2Q9Y698 323 aa7.07□□□□□ -1.28
HDAC9-202ENST00000405010 FAM25EA8MYX2 175 aa7.06□□□□□ -1.28
HDAC9-202ENST00000405010 PROS1P07225 676 aa7.06□□□□□ -1.28
HDAC9-202ENST00000405010 CFL1P23528 166 aaKnown RBP7.06□□□□□ -1.28
HDAC9-202ENST00000405010 HMGCLP35914 325 aa7.06□□□□□ -1.28
HDAC9-202ENST00000405010 ETV6P41212 452 aa7.06□□□□□ -1.28
HDAC9-202ENST00000405010 RPS26P62854 115 aaKnown RBP7.06□□□□□ -1.28
HDAC9-202ENST00000405010 GRIN2CQ14957 1233 aa7.06□□□□□ -1.28
HDAC9-202ENST00000405010 SF1Q15637 639 aaKnown RBP7.06□□□□□ -1.28
HDAC9-202ENST00000405010 POM121L1PQ3SYA9 428 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms