RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	ABHD10	Q9NUJ1	306 aa		6.34	□□□□□ -1.39
CEACAM1-208	ENST00000403461	GNPTG	Q9UJJ9	305 aa		6.34	□□□□□ -1.39
CEACAM1-208	ENST00000403461	ZDHHC8	Q9ULC8	765 aa		6.34	□□□□□ -1.39
CEACAM1-208	ENST00000403461	TTC7A	Q9ULT0	858 aa	Predicted RBP	6.34	□□□□□ -1.39
CEACAM1-208	ENST00000403461	NEU2	Q9Y3R4	380 aa		6.34	□□□□□ -1.39
CEACAM1-208	ENST00000403461	PCSK5	Q92824	1860 aa		6.34	□□□□□ -1.39
CEACAM1-208	ENST00000403461	GAGE12B	A1L429	117 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ASPDH	A6ND91	283 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	GAGE12H	A6NDE8	117 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR51F1	A6NGY5	319 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PRSS29P	A6NIE9	313 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	USP27X	A6NNY8	438 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ERI2	A8K979	691 aa	Known RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461		E7EVH7	732 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461		H0YGG7	62 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PRMT5	O14744	637 aa	Predicted RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PFDN6	O15212	129 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR1I1	O60431	355 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	GPC4	O75487	556 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SLCO2B1	O94956	709 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MATN4	O95460	622 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	C1orf105	O95561	183 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CELA2A	P08217	269 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	EZR	P15311	586 aa	Known RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF24	P17028	368 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HSD17B2	P37059	387 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SLC26A3	P40879	764 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MAGEA1	P43355	309 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	BDKRB1	P46663	353 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TTPA	P49638	278 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	AGTR2	P50052	363 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HADHB	P55084	474 aa	Known RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	NAP1L1	P55209	391 aa	Known RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	RWDD2B	P57060	319 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	KRTAP10-9	P60411	292 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ARF3	P61204	181 aa	Predicted RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TSTA3	Q13630	321 aa	Predicted RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TUBA3C	Q13748	450 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PRTG	Q2VWP7	1150 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	KCTD11	Q693B1	232 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PLAG1	Q6DJT9	500 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TMEM211	Q6ICI0	200 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TUBA3E	Q6PEY2	450 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TMEM205	Q6UW68	189 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CPEB2	Q7Z5Q1	589 aa	Known RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ADCK2	Q7Z695	626 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	LRRC6	Q86X45	466 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CNGA4	Q8IV77	575 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OTUD6B	Q8N6M0	293 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM71D	Q8N9W8	422 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PPHLN1	Q8NEY8	458 aa	Known RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR4L1	Q8NH43	312 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HMGCLL1	Q8TB92	370 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ADAMTS18	Q8TE60	1221 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SMPDL3A	Q92484	453 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SDCCAG3	Q96C92	435 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF503	Q96F45	646 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF559	Q9BR84	538 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MESP1	Q9BRJ9	268 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	DPH7	Q9BTV6	452 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	KCNK13	Q9HB14	408 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM114A2	Q9NRY5	505 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ANKRD10	Q9NXR5	420 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SLC45A2	Q9UMX9	530 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF835	Q9Y2P0	537 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PRRC2C	Q9Y520	2896 aa	Known RBP	6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MTOR	P42345	2549 aa		6.33	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZFHX3	Q15911	3703 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461		A0A0A6YYC8	382 aa	Predicted RBP	6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR2A25	A4D2G3	310 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	IQCF5	A8MTL0	148 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461		I3L1I5	382 aa	Predicted RBP	6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	RNASET2	O00584	256 aa	Known RBP	6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ASNA1	O43681	348 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	NDUFS3	O75489	264 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM155B	O75949	473 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZWINT	O95229	277 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	IPO7	O95373	1038 aa	Known RBP	6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ADRA1D	P25100	572 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PSMA3	P25788	255 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PSMB5	P28074	263 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CTNNA1	P35221	906 aa	Known RBP	6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MARCKSL1	P49006	195 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ABAT	P80404	500 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FOLH1	Q04609	750 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ACTN3	Q08043	901 aa	Predicted RBP	6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM53B	Q14153	422 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	GRB7	Q14451	532 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ANKRD20A4	Q4UJ75	823 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CCDC38	Q502W7	563 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CES4A	Q5XG92	561 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FCRLB	Q6BAA4	426 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SPINK14	Q6IE38	97 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	LRRC8B	Q6P9F7	803 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	VRK3	Q8IV63	474 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MPP5	Q8N3R9	675 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	AMER3	Q8N944	861 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	POGLUT1	Q8NBL1	392 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MYRIP	Q8NFW9	859 aa		6.32	□□□□□ -1.4
CEACAM1-208	ENST00000403461	OR13J1	Q8NGT2	312 aa		6.32	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms