RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PYDC2Q56P42 97 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 MPP7Q5T2T1 576 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 PDZK1Q5T2W1 519 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 C9orf64Q5T6V5 341 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC39A5Q6ZMH5 540 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 FAM83HQ6ZRV2 1179 aaPredicted RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 FAM129CQ86XR2 697 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 CHCHD4Q8N4Q1 142 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 PLA2G15Q8NCC3 412 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 TEX10Q9NXF1 929 aaPredicted RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 CLEC4AQ9UMR7 237 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 HTR3EA5X5Y0 456 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 METTL15A6NJ78 407 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 CCRL2O00421 344 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 RNASET2O00584 256 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 PI15O43692 258 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 DNAJB5O75953 348 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 CLEC2LP0C7M8 214 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 RAB15P59190 212 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 BCL7AQ4VC05 210 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 GPR151Q8TDV0 419 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 VMP1Q96GC9 406 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 TSSK6Q9BXA6 273 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 MMP28Q9H239 520 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 PCDHGA2Q9Y5H1 932 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 SCN5AQ14524 2016 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 AGAP14A8MT82 685 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 QSOX1O00391 747 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 AP3D1O14617 1153 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 TGM1P22735 817 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 HOXD12P35452 270 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■□□□ 12.2
PPP4R1-202ENST00000400555 OLR1P78380 273 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 GINS1Q14691 196 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 DHCR24Q15392 516 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 ZNF630Q2M218 657 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 CRTC2Q53ET0 693 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 OR2G6Q5TZ20 316 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 UBE2UQ5VVX9 321 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 KIAA1161Q6NSJ0 714 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 TSEN54Q7Z6J9 526 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 GATAD2BQ8WXI9 593 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SUSD6Q92537 303 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 NXPE3Q969Y0 559 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 BHLHE41Q9C0J9 482 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SSR3Q9UNL2 185 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 WBP11Q9Y2W2 641 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 PEX16Q9Y5Y5 336 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 IGLV3-16A0A075B6K0 115 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 C1orf226A1L170 272 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 DSCR3O14972 297 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 CCL5P13501 91 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 MYL12AP19105 171 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 PTX3P26022 381 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 PPP2R1BP30154 601 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 TUBA1BP68363 451 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SELENBP1Q13228 472 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SPHARQ15513 63 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 CDKL4Q5MAI5 379 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 ATAT1Q5SQI0 421 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 METTL2BQ6P1Q9 378 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SMARCD3Q6STE5 483 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 TUBA1AQ71U36 451 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 C12orf40Q86WS4 652 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 AMER3Q8N944 861 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 C12orf66Q96MD2 445 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 AIF1LQ9BQI0 150 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 WFDC6Q9BQY6 131 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 C1GALT1Q9NS00 363 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SPATA7Q9P0W8 599 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 TAAR2Q9P1P5 351 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 DEC1Q9P2X7 70 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SCN2AQ99250 2005 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 XIRP2A4UGR9 3374 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC5A10A0PJK1 596 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC35G4P0C7Q5 338 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 PRLHRP49683 370 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 LIM2P55344 173 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SEC23BQ15437 767 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 TIMM50Q3ZCQ8 353 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 RNASE12Q5GAN4 147 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 NRARPQ7Z6K4 114 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 TMC8Q8IU68 726 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 FAM46DQ8NEK8 389 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 OR52E4Q8NGH9 312 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 OR56A3Q8NH54 315 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 ZNF566Q969W8 418 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 MAGEB10Q96LZ2 347 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 NEDD4LQ96PU5 975 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC30A2Q9BRI3 323 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 NDEL1Q9GZM8 345 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 GPSM3Q9Y4H4 160 aa12.05□□□□□ -0.48
PPP4R1-202ENST00000400555 CPSF4LA6NMK7 179 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 IDH3BO43837 385 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 GPX5O75715 221 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 ARHGEF15O94989 841 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TNFSF8P32971 234 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 PPM1AP35813 382 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms