RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 IER5LQ5T953 404 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 LAMTOR1Q6IAA8 161 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 GRHL2Q6ISB3 625 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 TAS1R1Q7RTX1 841 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 CBARPQ8N350 705 aaPredicted RBP13.32□□□□□ -0.28
APOB-202ENST00000399256 Q8N402 240 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 OXR1Q8N573 874 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 OR52P1PQ8NH57 321 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 OR4K3Q96R72 315 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 RACGAP1Q9H0H5 632 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 ANKRA2Q9H9E1 313 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 IFNA14P01570 189 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 MPC1LP0DKB6 136 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 TNNI3P19429 210 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 WEE1P30291 646 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 PKLRP30613 574 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 OPRD1P41143 372 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 AP1S2P56377 157 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 MPEG1Q2M385 716 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 WSCD2Q2TBF2 565 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 OR2G6Q5TZ20 316 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 AMIGO1Q86WK6 493 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 LIX1LQ8IVB5 337 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.32□□□□□ -0.28
APOB-202ENST00000399256 OR7G3Q8NG95 312 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 UPRTQ96BW1 309 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 MAGEB10Q96LZ2 347 aaPredicted RBP13.32□□□□□ -0.28
APOB-202ENST00000399256 KCTD7Q96MP8 289 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 TM9SF2Q99805 663 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 KATNB1Q9BVA0 655 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 BHLHE41Q9C0J9 482 aaPredicted RBP13.32□□□□□ -0.28
APOB-202ENST00000399256 TMEM38AQ9H6F2 299 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 REEP4Q9H6H4 257 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 B3GAT2Q9NPZ5 323 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 ING3Q9NXR8 418 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 ANGPT4Q9Y264 503 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.31□□□□□ -0.28
APOB-202ENST00000399256 FAM240BA0A1B0GVZ2 78 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 TLX2O43763 284 aaPredicted RBP13.31□□□□□ -0.28
APOB-202ENST00000399256 RPS26P62854 115 aaKnown RBP13.31□□□□□ -0.28
APOB-202ENST00000399256 HEPACAMQ14CZ8 416 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 CRTC2Q53ET0 693 aaPredicted RBP13.31□□□□□ -0.28
APOB-202ENST00000399256 CNIH2Q6PI25 160 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 HSDL2Q6YN16 418 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 SLC24A5Q71RS6 500 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 OR52I1Q8NGK6 324 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 ALG14Q96F25 216 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 NIPAL2Q9H841 368 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 RC3H2Q9HBD1 1191 aaKnown RBP13.31□□□□□ -0.28
APOB-202ENST00000399256 GALNT9Q9HCQ5 603 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 KLHL42Q9P2K6 505 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 SLC23A1Q9UHI7 598 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 CCDC88CQ9P219 2028 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 LOC102723532A0A0G2JNH3 316 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 ARHGEF33A8MVX0 844 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 H0YIV9 168 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 UGDHO60701 494 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 HPGDSO60760 199 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 LGI1O95970 557 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 ADAP00813 363 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 LHCGRP22888 699 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 EVI2BP34910 448 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 PTSQ03393 145 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 SP140Q13342 867 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 TSTA3Q13630 321 aaPredicted RBP13.31□□□□□ -0.28
APOB-202ENST00000399256 PRSS53Q2L4Q9 553 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 ZNF630Q2M218 657 aaPredicted RBP13.31□□□□□ -0.28
APOB-202ENST00000399256 SPIN4Q56A73 249 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 ZNF628Q5EBL2 1059 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 TMEM201Q5SNT2 666 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 TIGD3Q6B0B8 471 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 CLP1Q92989 425 aaKnown RBP13.31□□□□□ -0.28
APOB-202ENST00000399256 DHRS9Q9BPW9 319 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 ATP13A2Q9NQ11 1180 aa13.31□□□□□ -0.28
APOB-202ENST00000399256 TMEM202A6NGA9 273 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 PRKYO43930 277 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 PCBP3P57721 371 aaKnown RBP13.3□□□□□ -0.28
APOB-202ENST00000399256 C2orf80Q0P641 193 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 TARDBPQ13148 414 aaKnown RBP eCLIP13.3□□□□□ -0.28
APOB-202ENST00000399256 ILKQ13418 452 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 IL18Q14116 193 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 ELOAQ14241 798 aaKnown RBP13.3□□□□□ -0.28
APOB-202ENST00000399256 MPPE1Q53F39 396 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 C12orf73Q69YU5 71 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 CCSAPQ6IQ19 270 aaPredicted RBP13.3□□□□□ -0.28
APOB-202ENST00000399256 AGTRAPQ6RW13 159 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 DEF8Q6ZN54 512 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 RBM45Q8IUH3 476 aaKnown RBP13.3□□□□□ -0.28
APOB-202ENST00000399256 ZFP41Q8N8Y5 198 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 DCAF4L2Q8NA75 395 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 PPCDCQ96CD2 204 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 POLR2J3Q9H1A7 115 aaKnown RBP13.3□□□□□ -0.28
APOB-202ENST00000399256 BRF2Q9HAW0 419 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 RBFOX1Q9NWB1 397 aaKnown RBP13.3□□□□□ -0.28
APOB-202ENST00000399256 TMEM161AQ9NX61 479 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 ZNF106Q9H2Y7 1883 aaKnown RBP13.3□□□□□ -0.28
APOB-202ENST00000399256 NINQ8N4C6 2090 aa13.3□□□□□ -0.28
APOB-202ENST00000399256 ARRDC5A6NEK1 342 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms