RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SPRR3Q9UBC9 169 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ACAD8Q9UKU7 415 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 MTO1Q9Y2Z2 717 aaKnown RBP11.11□□□□□ -0.63
TFF3-202ENST00000398431 MPDZO75970 2070 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 ABCA4P78363 2273 aa11.11□□□□□ -0.63
TFF3-202ENST00000398431 TRGV5A0A0B4J1U4 118 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 GOLGA6L10A0A0M3HER8 536 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 SYNDIG1LA6NDD5 238 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 E7ESA3 106 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 HRKO00198 91 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 RTCAO00442 366 aaKnown RBP11.1□□□□□ -0.63
TFF3-202ENST00000398431 WDR1O75083 606 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 ZWINTO95229 277 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 IGKV3-11P04433 115 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 ATP5A1P25705 553 aaKnown RBP11.1□□□□□ -0.63
TFF3-202ENST00000398431 PAFAH1B1P43034 410 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 HSPA7P48741 367 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 MAN2A2P49641 1150 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 ASPHQ12797 758 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 SERTAD2Q14140 314 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 OR4D1Q15615 310 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 C1orf185Q5T7R7 199 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 SLC22A10Q63ZE4 541 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 TGIF2LYQ8IUE0 185 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 OR4N5Q8IXE1 308 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 ZZZ3Q8IYH5 903 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 ACOT4Q8N9L9 421 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 LRRN4CLQ8ND94 238 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 SPATA4Q8NEY3 305 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 OR5L2Q8NGL0 311 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 KIAA1191Q96A73 305 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 SARAFQ96BY9 339 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 PTCD3Q96EY7 689 aaKnown RBP11.1□□□□□ -0.63
TFF3-202ENST00000398431 SENP5Q96HI0 755 aaPredicted RBP11.1□□□□□ -0.63
TFF3-202ENST00000398431 MS4A8Q9BY19 250 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 RHOJQ9H4E5 214 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 POPDC3Q9HBV1 291 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 SLC24A3Q9HC58 644 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 ZNF446Q9NWS9 450 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 ALKBH4Q9NXW9 302 aa11.1□□□□□ -0.63
TFF3-202ENST00000398431 PTBP2Q9UKA9 531 aaKnown RBP11.1□□□□□ -0.63
TFF3-202ENST00000398431 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.1□□□□□ -0.63
TFF3-202ENST00000398431 MAP1AP78559 2803 aaPredicted RBP11.1□□□□□ -0.63
TFF3-202ENST00000398431 CCDC188H7C350 402 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 SYT5O00445 386 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 CLGNO14967 610 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 FGF17O60258 216 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 HCN1O60741 890 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 STK16O75716 305 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 SCELO95171 688 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 P04436 131 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 CD1DP15813 335 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 GMPRP36959 345 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 CASP2P42575 452 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 ARL4CP56559 192 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 RCN2Q14257 317 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 SLC25A35Q3KQZ1 300 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 CDKL4Q5MAI5 379 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 WLSQ5T9L3 541 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 RIPPLY2Q5TAB7 128 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 SULT1C3Q6IMI6 304 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 POMZP3Q6PJE2 187 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 FRA10AC1Q70Z53 315 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 GPSM1Q86YR5 675 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 C9orf40Q8IXQ3 194 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 TCAIMQ8N3R3 496 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 FBXO36Q8NEA4 188 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 NUBPLQ8TB37 319 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 DOK4Q8TEW6 326 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 PAQR8Q8TEZ7 354 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 NINJ1Q92982 152 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 PPWD1Q96BP3 646 aaKnown RBP11.09□□□□□ -0.63
TFF3-202ENST00000398431 VPS39Q96JC1 886 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 KCNC2Q96PR1 638 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 TBCDQ9BTW9 1192 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 LDAHQ9H6V9 325 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 COPS7BQ9H9Q2 264 aaPredicted RBP11.09□□□□□ -0.63
TFF3-202ENST00000398431 CAB39LQ9H9S4 337 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 RASSF1Q9NS23 344 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 ST6GALNAC2Q9UJ37 374 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 RAB21Q9UL25 225 aa11.09□□□□□ -0.63
TFF3-202ENST00000398431 NIPBLQ6KC79 2804 aaeCLIP11.08□□□□□ -0.63
TFF3-202ENST00000398431 ZNF469Q96JG9 3925 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 LRRC3CA6NJW4 275 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 WASHC1A8K0Z3 465 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 CXorf49A8MYA2 514 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 KDM4EB2RXH2 506 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 PHGDHO43175 533 aaKnown RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 PROM1O43490 865 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 SH3BGRLO75368 114 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 TGFB1P01137 390 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 CCDC166P0CW27 439 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 KLK2P20151 261 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 HIST1H1TP22492 207 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 HPDP32754 393 aaPredicted RBP11.08□□□□□ -0.64
TFF3-202ENST00000398431 MSH2P43246 934 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 STT3AP46977 705 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 POU4F1Q01851 419 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 FOLH1Q04609 750 aa11.08□□□□□ -0.64
TFF3-202ENST00000398431 TGM3Q08188 693 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms