RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ALBP02768 609 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 ZNF806P0C7X5 589 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 NELFEP18615 380 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 MLLT3P42568 568 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 GRK6P43250 576 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 DUSP3P51452 185 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 C21orf58P58505 322 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 CHRNB3Q05901 458 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 SF3A2Q15428 464 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 PGS1Q32NB8 556 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 ZNF793Q6ZN11 406 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 CARFQ8N187 725 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 DTWD1Q8N5C7 304 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 CSNK1A1LQ8N752 337 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 AMER3Q8N944 861 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 MAGEE2Q8TD90 523 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 GAL3ST3Q96A11 431 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 RNF145Q96MT1 663 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 NUDT22Q9BRQ3 303 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 TRIM8Q9BZR9 551 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 PDE7BQ9NP56 450 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 MYNNQ9NPC7 610 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 PRDM7Q9NQW5 492 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 MAPRE3Q9UPY8 281 aa18.31■□□□□ 0.52
PDLIM2-204ENST00000397760 ZNF318Q5VUA4 2279 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 ZSCAN9O15535 394 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 PGRP06401 933 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 ZNF888P0CJ79 500 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 COX7A2P14406 83 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 IL1RNP18510 177 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 HLCSP50747 726 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 CDH15P55291 814 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 CCL7P80098 99 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 SQSTM1Q13501 440 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 UGT8Q16880 541 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 SNAP47Q5SQN1 464 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 MANEAQ5SRI9 462 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 DBX2Q6ZNG2 339 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 PRR23CQ6ZRP0 262 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 GPR180Q86V85 440 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 CROCCP3Q8IVE0 287 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 PRSS33Q8NF86 280 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 OR7A2PQ8NGA2 310 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 IFI44Q8TCB0 444 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 UTP15Q8TED0 518 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 STARD8Q92502 1023 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 ISOC1Q96CN7 298 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 VPS50Q96JG6 964 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 ZNF583Q96ND8 569 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 PRRX2Q99811 253 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 NPLQ9BXD5 320 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 KCNH6Q9H252 994 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 GOLGA4Q13439 2230 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 DMDP11532 3685 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 A0A0A6YYD5 115 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 UPK1AO00322 258 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 SCAMP2O15127 329 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 TMPRSS11DO60235 418 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 SRPX2O60687 465 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 SCELO95171 688 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 HIST1H1TP22492 207 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 ATP5A1P25705 553 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 S100A3P33764 101 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 HPCAL1P37235 193 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 ARSFP54793 590 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 BTN3A2P78410 334 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 SRSF11Q05519 484 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 C2orf80Q0P641 193 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 DAG1Q14118 895 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 MYBPC3Q14896 1274 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 INAVAQ3KP66 663 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 FAM71E1Q6IPT2 247 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 ACOT4Q8N9L9 421 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 OR8K5Q8NH50 307 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 ZCCHC10Q8TBK6 192 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 GTF2H4Q92759 462 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 TM4SF18Q96CE8 201 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 AURKBQ96GD4 344 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 SEPHS2Q99611 448 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 NLNQ9BYT8 704 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 CHRNA10Q9GZZ6 450 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 NTN4Q9HB63 628 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 NEUROG3Q9Y4Z2 214 aa18.3■□□□□ 0.52
PDLIM2-204ENST00000397760 GABRR3A8MPY1 467 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 B3GALT4O96024 378 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 RPLP0P05388 317 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 IL3P08700 152 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 SMIM10L1P0DMW3 83 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 DCKP27707 260 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 TSFMP43897 325 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 ARL4DP49703 201 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 SEPHS1P49903 392 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 HNRNPFP52597 415 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 MC1RQ01726 317 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 MAPKAPK3Q16644 382 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 DPY19L1Q2PZI1 675 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 TMEM71Q6P5X7 295 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 IKBIPQ70UQ0 350 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 SVOPLQ8N434 492 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 OR2T12Q8NG77 320 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms