RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZCCHC7Q8N3Z6 543 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 APOBEC4Q8WW27 367 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 BTBD10Q9BSF8 475 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 EFHD1Q9BUP0 239 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 LRMDAQ9H2I8 198 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 REEP4Q9H6H4 257 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 FBXO8Q9NRD0 319 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 NDE1Q9NXR1 346 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 LEF1Q9UJU2 399 aaPredicted RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 TMEM184BQ9Y519 407 aaPredicted RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 TMEM150CB9EJG8 249 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 FBP2O00757 339 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 MRASO14807 208 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 B3GALT2O43825 422 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 TMPRSS11DO60235 418 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 PRKAR1AP10644 381 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 DDX5P17844 614 aaKnown RBP12.5□□□□□ -0.41
SEC13-209ENST00000397117 CERS1P27544 350 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 KIR3DL1P43629 444 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 GABRA4P48169 554 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 CD97P48960 835 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 DGKQP52824 942 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 SKP1P63208 163 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 ABHD18Q0P651 414 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 DEFB109BQ30KR1 87 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 CRTC2Q53ET0 693 aaPredicted RBP12.5□□□□□ -0.41
SEC13-209ENST00000397117 COQ5Q5HYK3 327 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 FAM71E1Q6IPT2 247 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 AMER3Q8N944 861 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 TTC29Q8NA56 475 aaPredicted RBP12.5□□□□□ -0.41
SEC13-209ENST00000397117 RBM15BQ8NDT2 890 aaKnown RBP12.5□□□□□ -0.41
SEC13-209ENST00000397117 NUDT8Q8WV74 236 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 MIB2Q96AX9 1013 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 TM4SF18Q96CE8 201 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 SLC7A6OSQ96CW6 309 aaPredicted RBP12.5□□□□□ -0.41
SEC13-209ENST00000397117 OR52E6Q96RD3 313 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 SERINC2Q96SA4 455 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 FAIM2Q9BWQ8 316 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 C1orf21Q9H246 121 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 ANKHQ9HCJ1 492 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 MIEF1Q9NQG6 463 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 ATAD3AQ9NVI7 634 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 LYARQ9NX58 379 aaKnown RBP12.5□□□□□ -0.41
SEC13-209ENST00000397117 TAS2R1Q9NYW7 299 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 SLC22A7Q9Y694 548 aa12.5□□□□□ -0.41
SEC13-209ENST00000397117 OR2B3O76000 313 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 KLHL18O94889 574 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 SCELO95171 688 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 B3GALT4O96024 378 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 CTSBP07858 339 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 SMIM10L1P0DMW3 83 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 ALDH9A1P49189 494 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 SLC25A3Q00325 362 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 KLC1Q07866 573 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 GRM7Q14831 915 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 GPR19Q15760 415 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 MAPKAPK3Q16644 382 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 UGT8Q16880 541 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 PRTGQ2VWP7 1150 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 DNAL1Q4LDG9 190 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 GARNL3Q5VVW2 1013 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 C16orf89Q6UX73 402 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 CEACAM20Q6UY09 585 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 GPR180Q86V85 440 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 GPR135Q8IZ08 494 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 VPS37AQ8NEZ2 397 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 OR7A2PQ8NGA2 310 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 FBXO27Q8NI29 283 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.49□□□□□ -0.413e-65■■■■■ 27.1
SEC13-209ENST00000397117 KIAA1143Q96AT1 154 aaPredicted RBP12.49□□□□□ -0.41
SEC13-209ENST00000397117 PPCDCQ96CD2 204 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 MTERF3Q96E29 417 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 SMIM10Q96HG1 83 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 ZNF285Q96NJ3 590 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 CTRCQ99895 268 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 ZPBPQ9BS86 351 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 RMND5AQ9H871 391 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 SH3BP4Q9P0V3 963 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 SERTAD3Q9UJW9 196 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 FBXW2Q9UKT8 454 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 NAALAD2Q9Y3Q0 740 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 UNC79Q9P2D8 2635 aa12.49□□□□□ -0.41
SEC13-209ENST00000397117 HYKKA2RU49 373 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 BLACEA4D250 179 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 GABRR3A8MPY1 467 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 FURINP09958 794 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 MSL3P1P0C860 447 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 DRD2P14416 443 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 FOLR1P15328 257 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 IL1RNP18510 177 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 DDCP20711 480 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ITGA1P56199 1179 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 MC1RQ01726 317 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ACY1Q03154 408 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 NDUFAF5Q5TEU4 345 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 ANKRD26P1Q6NSI1 321 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 NIPAL1Q6NVV3 410 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 DSELQ8IZU8 1212 aa12.48□□□□□ -0.41
SEC13-209ENST00000397117 KIF2BQ8N4N8 673 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms