RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 LIN52Q52LA3 116 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 DNAJB8Q8NHS0 232 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 LPAR4Q99677 370 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 HERPUD2Q9BSE4 406 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 PEX16Q9Y5Y5 336 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 UNC119BA6NIH7 251 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 TNFSF4P23510 183 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 MLLT6P55198 1093 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-208ENST00000397030 CRYZQ08257 329 aaKnown RBP16.72■□□□□ 0.27
MCF2L-208ENST00000397030 OR51G2Q8NGK0 314 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 PROKR1Q8TCW9 393 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 EBF4Q9BQW3 602 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 SLC29A3Q9BZD2 475 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 TWSG1Q9GZX9 223 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 HEBP1Q9NRV9 189 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 TMED5Q9Y3A6 229 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 A0A1B0GVC2 190 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 GABBR2O75899 941 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 F10P00742 488 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 POU3F2P20265 443 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-208ENST00000397030 SOX9P48436 509 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 ATXN7L3Q14CW9 347 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-208ENST00000397030 LRRC37A5PQ49AS3 106 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 BBS10Q8TAM1 723 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 OSTF1Q92882 214 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 ST6GALNAC4Q9H4F1 302 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 MYEF2Q9P2K5 600 aaKnown RBP16.72■□□□□ 0.27
MCF2L-208ENST00000397030 ZDHHC2Q9UIJ5 367 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 GJD2Q9UKL4 321 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 BAIAP2Q9UQB8 552 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 APOL3O95236 402 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 AHSGP02765 367 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 THBS2P35442 1172 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 NFE2L1Q14494 772 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 ELAVL3Q14576 367 aaKnown RBP16.72■□□□□ 0.27
MCF2L-208ENST00000397030 GRM7Q14831 915 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 SEC23BQ15437 767 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 KHDC1LQ5JSQ8 128 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 RTP2Q5QGT7 225 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 FTMTQ8N4E7 242 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 OR56A3Q8NH54 315 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 TPT1P8Q9HAU6 139 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 VDAC3Q9Y277 283 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 TNFSF12O43508 249 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 CD36P16671 472 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 P2RY2P41231 377 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 RIDAP52758 137 aaKnown RBP16.72■□□□□ 0.27
MCF2L-208ENST00000397030 SIM1P81133 766 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-208ENST00000397030 EMC10Q5UCC4 262 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 FAM205BPQ63HN1 556 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 FAM180BQ6P0A1 224 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 IGSF8Q969P0 613 aa16.72■□□□□ 0.27
MCF2L-208ENST00000397030 NIPAL4Q0D2K0 466 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 NPTX1Q15818 432 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 OR4C11Q6IEV9 310 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 LARP4Q71RC2 724 aaKnown RBP eCLIP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 UEVLDQ8IX04 471 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 NPRL2Q8WTW4 380 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 ULBP3Q9BZM4 244 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 REEP4Q9H6H4 257 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 ZNF395Q9H8N7 513 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 SIT1Q9Y3P8 196 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 RPS26P62854 115 aaKnown RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 MFSD8Q8NHS3 518 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 CD300LFQ8TDQ1 290 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 HOXB13Q92826 284 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 TMEM74Q96NL1 305 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 SLCO3A1Q9UIG8 710 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 EN2P19622 333 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 DRD1P21728 446 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 HNRNPA2B1P22626 353 aaKnown RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 PEX2P28328 305 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 MAGEA11P43364 429 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 SF3B4Q15427 424 aaKnown RBP eCLIP16.71■□□□□ 0.272e-6■■■□□ 15.2
MCF2L-208ENST00000397030 KIAA0319Q5VV43 1072 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 PELOQ9BRX2 385 aaKnown RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 RAB26Q9ULW5 256 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 AK4P27144 223 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 CD70P32970 193 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 CCL11P51671 97 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 TXNRD3NBQ6F5E7 133 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 KIAA1211LQ6NV74 962 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 ZNF765Q7L2R6 523 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 OR6Q1Q8NGQ2 317 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 SOX17Q9H6I2 414 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-208ENST00000397030 GIMAP2Q9UG22 337 aa16.71■□□□□ 0.27
MCF2L-208ENST00000397030 LMO7Q8WWI1 1683 aa16.71■□□□□ 0.26
MCF2L-208ENST00000397030 C2orf72A6NCS6 295 aa16.71■□□□□ 0.26
MCF2L-208ENST00000397030 ZNF821O75541 412 aaPredicted RBP16.71■□□□□ 0.26
MCF2L-208ENST00000397030 ADRB3P13945 408 aa16.71■□□□□ 0.26
MCF2L-208ENST00000397030 SLC35G1Q2M3R5 365 aa16.71■□□□□ 0.26
MCF2L-208ENST00000397030 ZNF554Q86TJ5 538 aa16.71■□□□□ 0.26
MCF2L-208ENST00000397030 ATRNO75882 1429 aa16.71■□□□□ 0.26
MCF2L-208ENST00000397030 EI24O14681 340 aa16.7■□□□□ 0.26
MCF2L-208ENST00000397030 ACOX3O15254 700 aa16.7■□□□□ 0.26
MCF2L-208ENST00000397030 CDRT1O95170 752 aa16.7■□□□□ 0.26
MCF2L-208ENST00000397030 ACY1Q03154 408 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms