RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ASXL3Q9C0F0 2248 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 LNP1A1A4G5 178 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 ELOVL7A1L3X0 281 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 HYKKA2RU49 373 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 CAPNS1P04632 268 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 EEF1A2Q05639 463 aaKnown RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 SLC34A1Q06495 639 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 VAC14Q08AM6 782 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 C16orf72Q14CZ0 275 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 OR52N2Q8NGI0 321 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 OR9A4Q8NGU2 314 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 FAM110BQ8TC76 370 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 NAT6Q93015 286 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 DPH2Q9BQC3 489 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 NEUROD4Q9HD90 331 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 ATXN7L1Q9ULK2 861 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 TMEM184BQ9Y519 407 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 CABIN1Q9Y6J0 2220 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CPED1A4D0V7 1026 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 ZNF860A6NHJ4 632 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 TNFRSF10AO00220 468 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 NTN3O00634 580 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 KHNYNO15037 678 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 NSA2O95478 260 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 BMP2P12643 396 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CPN2P22792 545 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 MANFP55145 182 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 AP2B1P63010 937 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 LAIR1Q6GTX8 287 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 GLYATQ6IB77 296 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 ZFP1Q6P2D0 407 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 SUMF1Q8NBK3 374 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 PAPD5Q8NDF8 572 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 OR1L3Q8NH93 324 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 IFI44Q8TCB0 444 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 ZNF501Q96CX3 271 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 GTPBP2Q9BX10 602 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 SOHLH2Q9NX45 425 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 ACSL6Q9UKU0 697 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CORO2BQ9UQ03 480 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 TTC28Q96AY4 2481 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 IGHV5-10-1A0A0J9YXX1 117 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 RPLP0P05388 317 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 BUD31P41223 144 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 RAB38P57729 211 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 GPR19Q15760 415 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CLPPQ16740 277 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 OR52E8Q6IFG1 317 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 MED25Q71SY5 747 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 ADGRG5Q8IZF4 528 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 ARMC1Q9NVT9 282 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 NTMQ9P121 344 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 EVPLLA8MZ36 301 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CDX4O14627 284 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 RDH16O75452 317 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CPNE6O95741 557 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 NUDT7P0C024 238 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 SLC7A1P30825 629 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 SEPHS1P49903 392 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 POLE2P56282 527 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 COL9A2Q14055 689 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 TMEM64Q6YI46 380 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 LILRA2Q8N149 483 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 TRIML2Q8N7C3 387 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 TNIP2Q8NFZ5 429 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 PNPT1Q8TCS8 783 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 ANKRD9Q96BM1 317 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 FAM120BQ96EK7 910 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 SERHL2Q9H4I8 314 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CLK4Q9HAZ1 481 aaKnown RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 ANKHQ9HCJ1 492 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CCM2LQ9NUG4 571 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-204ENST00000396548 PCDHGB4Q9UN71 923 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 CLDN16Q9Y5I7 305 aa11.98□□□□□ -0.49
TRIM39-204ENST00000396548 A0A0A6YYC8 382 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-204ENST00000396548 I3L1I5 382 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-204ENST00000396548 NVLO15381 856 aaKnown RBP11.97□□□□□ -0.49
TRIM39-204ENST00000396548 GCM2O75603 506 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-204ENST00000396548 CRYBA2P53672 197 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 NIPAL1Q6NVV3 410 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 SPATA24Q86W54 205 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 OR5AK3PQ8NH89 298 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 NETO1Q8TDF5 533 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 DPYSL5Q9BPU6 564 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 OLAHQ9NV23 265 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 RIMS3Q9UJD0 308 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 FAM227AF5H4B4 570 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 CXCR6O00574 342 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 CHST10O43529 356 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 HYAL3O43820 417 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-204ENST00000396548 RETP07949 1114 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 NCBP2P52298 156 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRIM39-204ENST00000396548 HSPB3Q12988 150 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 VMACQ2NL98 169 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 AASDHQ4L235 1098 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-204ENST00000396548 SLITRK4Q8IW52 837 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 CANT1Q8WVQ1 401 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 TRIM15Q9C019 465 aa11.97□□□□□ -0.49
TRIM39-204ENST00000396548 TMEM38AQ9H6F2 299 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms