RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 TSTA3Q13630 321 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 IL10RAQ13651 578 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 GPR19Q15760 415 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 RIMKLAQ8IXN7 391 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 FAM26EQ8N5C1 309 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 KRTCAP2Q8N6L1 136 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 ABHD11Q8NFV4 315 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 OR8K5Q8NH50 307 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 DNAJB8Q8NHS0 232 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 THAP4Q8WY91 577 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 SLC22A18Q96BI1 424 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 ZNF501Q96CX3 271 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 IL17FQ96PD4 163 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 TRIM8Q9BZR9 551 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 NT5DC2Q9H857 520 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 COPS7BQ9H9Q2 264 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 VPS29Q9UBQ0 182 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 PLAGL1Q9UM63 463 aa16.53■□□□□ 0.24
TNFSF13-205ENST00000396545 FOXE1O00358 373 aaPredicted RBP16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 ARPC2O15144 300 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 PRMT3O60678 531 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 SCRG1O75711 98 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 FKBP9O95302 570 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 TACR1P25103 407 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 PIK3CBP42338 1070 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 CCR8P51685 355 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 C21orf58P58505 322 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 PRDX1Q06830 199 aaKnown RBP16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 MAPKAPK3Q16644 382 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 SFT2D3Q587I9 215 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 NOXRED1Q6NXP6 359 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 CYP2R1Q6VVX0 501 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 SLC38A9Q8NBW4 561 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 CATSPER1Q8NEC5 780 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 ADCY4Q8NFM4 1077 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 OR7G3Q8NG95 312 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 PPM1MQ96MI6 270 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 KCTD14Q9BQ13 255 aaPredicted RBP16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 AIF1LQ9BQI0 150 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 ARMC1Q9NVT9 282 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 TAC3Q9UHF0 121 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 ICKQ9UPZ9 632 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 SNX13Q9Y5W8 968 aa16.52■□□□□ 0.24
TNFSF13-205ENST00000396545 NBPF19A0A087WUL8 3843 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 TRBV5-3A0A0A0MS03 114 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 A0A1W2PPV9 198 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 RPS15P62841 145 aaKnown RBP16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 CPZQ66K79 652 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 ARMC6Q6NXE6 501 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 MSANTD1Q6ZTZ1 278 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 ATCAYQ86WG3 371 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 AMIGO1Q86WK6 493 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 RNF175Q8N4F7 328 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 LINC01555Q8NAE3 123 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 OR4K1Q8NGD4 311 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 LCN9Q8WX39 176 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 LRFN5Q96NI6 719 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 CCM2LQ9NUG4 571 aaPredicted RBP16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 POMT2Q9UKY4 750 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 RUVBL1Q9Y265 456 aaKnown RBP16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 SPTBP11277 2137 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 GP1BBP13224 206 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 HOXB9P17482 250 aaPredicted RBP16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 GSTM2P28161 218 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 GRIA3P42263 894 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 GTF2A1P52655 376 aaPredicted RBP16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 PHC1P78364 1004 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 SLBPQ14493 270 aaKnown RBP eCLIP16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 LRIF1Q5T3J3 769 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 TMTC4Q5T4D3 741 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 TMIGD1Q6UXZ0 262 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 CLHC1Q8NHS4 586 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 MR1Q95460 341 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 TSSK3Q96PN8 268 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 OR52E6Q96RD3 313 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 SOHLH2Q9NX45 425 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 VAPAQ9P0L0 249 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 EGFL7Q9UHF1 273 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 SH2B3Q9UQQ2 575 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 FARSAQ9Y285 508 aaKnown RBP16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 AP3M1Q9Y2T2 418 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 DTNAQ9Y4J8 743 aa16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 PCDHGA9Q9Y5G4 932 aaKnown RBP16.51■□□□□ 0.23
TNFSF13-205ENST00000396545 MED13Q9UHV7 2174 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 UNC79Q9P2D8 2635 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 TNRC6AQ8NDV7 1962 aaKnown RBP16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 TCRBV5S2A0A599 114 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 MAGEB17A8MXT2 336 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 PRICKLE3O43900 615 aaPredicted RBP16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 ERN1O75460 977 aaKnown RBP16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 CDH1P12830 882 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 POLR2CP19387 275 aaPredicted RBP16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 PRPS1L1P21108 318 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 SELPLGQ14242 412 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 KIR2DS3Q14952 304 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 LRRC36Q1X8D7 754 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 DPY19L1Q2PZI1 675 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 CATSPEREQ5SY80 951 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 SPPL2CQ8IUH8 684 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 MSRB3Q8IXL7 192 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms