RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SPASTQ9UBP0 616 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TBX21Q9UL17 535 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 PRG3Q9Y2Y8 225 aaPredicted RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 HSPE1-MOB4S4R3N1 261 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 CACNA1CQ13936 2221 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 A0A1B0GV50 99 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 BTBD17A6NE02 478 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 H3BRB1 525 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 SEC22BO75396 215 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 PAPSS2O95340 614 aaPredicted RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 GUCA1CO95843 209 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 WDPCPO95876 746 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TFP02787 698 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 BMP1P13497 986 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TCF3P15923 654 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 HK1P19367 917 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 SULT1E1P49888 294 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 RAB10P61026 200 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 BTN3A2P78410 334 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 SPIBQ01892 262 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 KRT33BQ14525 404 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 ZBTB6Q15916 424 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 FAM76BQ5HYJ3 339 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 RBMS3Q6XE24 437 aaKnown RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 B3GNT8Q7Z7M8 397 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 FBXO22Q8NEZ5 403 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 SPPL2BQ8TCT7 592 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TM9SF4Q92544 642 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 DNAJA3Q96EY1 480 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TRMT61AQ96FX7 289 aaKnown RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 DPYSL5Q9BPU6 564 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 TMED9Q9BVK6 235 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 IFT27Q9BW83 186 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 NXF3Q9H4D5 531 aaKnown RBP8.08□□□□□ -1.12
NDE1-202ENST00000396355 GOLGA2P5Q9HBQ8 144 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 GSN-AS1Q9NRJ2 163 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 MS4A12Q9NXJ0 267 aa8.08□□□□□ -1.12
NDE1-202ENST00000396355 MRPS14O60783 128 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 TULP3O75386 442 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 CCNB2O95067 398 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 CBSLP0DN79 551 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 TPSB2P20231 275 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 CBSP35520 551 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 RPL38P63173 70 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 FABP9Q0Z7S8 132 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 TPSAB1Q15661 275 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 EIF2S3LQ2VIR3 472 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 PCID2Q5JVF3 399 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ZNF484Q5JVG2 852 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 FAM74A1Q5RGS3 127 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 CNIH2Q6PI25 160 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 TTLL10Q6ZVT0 673 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 TRILQ7L0X0 811 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ZNF280BQ86YH2 543 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 GJD3Q8N144 294 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 OR8D4Q8NGM9 314 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 OR10K1Q8NGX5 313 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SENP8Q96LD8 212 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 C19orf43Q9BQ61 176 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ZNF251Q9BRH9 671 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ADAT1Q9BUB4 502 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 PINK1Q9BXM7 581 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SEMA4CQ9C0C4 833 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 TMEM231Q9H6L2 316 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SLAMF8Q9P0V8 285 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 MYEF2Q9P2K5 600 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 GHRLQ9UBU3 117 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ANKDD1BA6NHY2 528 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 EEF2KO00418 725 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 ADAMDEC1O15204 470 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 G6PDP11413 515 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 KIR2DL3P43628 341 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 PSMD4P55036 377 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 PTSQ03393 145 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SMYD5Q6GMV2 418 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SLC26A9Q7LBE3 791 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 TEX19Q8NA77 164 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 PAPD5Q8NDF8 572 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 STOML3Q8TAV4 291 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 CD300LFQ8TDQ1 290 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ATOH1Q92858 354 aaPredicted RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 PYCR2Q96C36 320 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 THOC3Q96J01 351 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 COL21A1Q96P44 957 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 DDOQ99489 341 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 RIOK2Q9BVS4 552 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 LRRC3Q9BY71 257 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SLC19A3Q9BZV2 496 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 OR10A4Q9H209 315 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 NOSIPQ9Y314 301 aaKnown RBP8.07□□□□□ -1.12
NDE1-202ENST00000396355 MYLKQ15746 1914 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 A0A1W2PRQ8 180 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 BBIP1A8MTZ0 92 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SULT1C2O00338 296 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 ADAM12O43184 909 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 BNIP3LO60238 219 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 GREM1O60565 184 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 CAPN3P20807 821 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SLC6A2P23975 617 aa8.07□□□□□ -1.12
NDE1-202ENST00000396355 SLC6A4P31645 630 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms