RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 HOXB6P17509 224 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 RAB3BP20337 219 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 PVALBP20472 110 aaPredicted RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 ITGB7P26010 798 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GABRB3P28472 473 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GJA4P35212 333 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 DPP6P42658 865 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CBX5P45973 191 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GSTM5P46439 218 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 AGTR2P50052 363 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 TSPAN5P62079 268 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 NFKB2Q00653 900 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 IFITM2Q01629 132 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 RAPSNQ13702 412 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 KCNC3Q14003 757 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 OR4D1Q15615 310 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 DUSP7Q16829 419 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 TATDN3Q17R31 274 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 PTCHD3Q3KNS1 767 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 DPPA4Q7L190 304 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 TAF8Q7Z7C8 310 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 MINDY1Q8N5J2 469 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 OR10Q1Q8NGQ4 319 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 NELL1Q92832 810 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 POP5Q969H6 163 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 AHCYL2Q96HN2 611 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 ZSWIM3Q96MP5 696 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 C12orf57Q99622 126 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 SLC29A3Q9BZD2 475 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CARS2Q9HA77 564 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 FBRSQ9HAH7 460 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 OAS3Q9Y6K5 1087 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 PIAS3Q9Y6X2 628 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 NUP205Q92621 2012 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 MYO7AQ13402 2215 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 UBE2QL1A1L167 161 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GSAPA4D1B5 854 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 METTL21EPA6NDL7 271 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 IGLON5A6NGN9 336 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 FAM220BPB1ANY3 271 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 MAN2B1O00754 1011 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 RFXANKO14593 260 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ZNF780AO75290 641 aaPredicted RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 CTRB1P17538 263 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 LCN1P31025 176 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CCR2P41597 374 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 STAT5AP42229 794 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 RPS5P46782 204 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 PREPP48147 710 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CLCNKAP51800 687 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 SKP1P63208 163 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ALDH6A1Q02252 535 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 CREB5Q02930 508 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 PRKCDQ05655 676 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 LRRC32Q14392 662 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 FLYWCH1Q4VC44 716 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CATSPEREQ5SY80 951 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ZNF648Q5T619 568 aaPredicted RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 CPTPQ5TA50 214 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CTRB2Q6GPI1 263 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 AGTRAPQ6RW13 159 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 HACD2Q6Y1H2 254 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 THOC6Q86W42 341 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 TMC8Q8IU68 726 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ACVR1CQ8NER5 493 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 OR10G6Q8NH81 332 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 C9orf43Q8TAL5 461 aaPredicted RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 FRS2Q8WU20 508 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 LCN9Q8WX39 176 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 MYLIPQ8WY64 445 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ST8SIA4Q92187 359 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 TMEM203Q969S6 136 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 PANX1Q96RD7 426 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 DOK1Q99704 481 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 SLC30A3Q99726 388 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ZNF576Q9H609 170 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 XKR8Q9H6D3 395 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 TMEM138Q9NPI0 162 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ACTR10Q9NZ32 417 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GMPR2Q9P2T1 348 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 TRPC4Q9UBN4 977 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CLEC4EQ9ULY5 219 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 LOC105371267A0A1B0GV96 52 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 KCNK2O95069 426 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FABP3P05413 133 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ANXA4P09525 319 aaPredicted RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 CR2P20023 1033 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 DRD1P21728 446 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 CMPK1P30085 196 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 TLX1P31314 330 aaPredicted RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 BLKP51451 505 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 DGKEP52429 567 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RGS1Q08116 209 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 C2orf80Q0P641 193 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 HSF5Q4G112 596 aaPredicted RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 LIPIQ6XZB0 460 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 SH2D5Q6ZV89 423 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 HSD11B1LQ7Z5J1 315 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 SPRED1Q7Z699 444 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms