RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ARHGEF15O94989 841 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 TGM4P49221 684 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 GBX1Q14549 363 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 IDNKQ5T6J7 187 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 AMZ2Q86W34 360 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 RASGEF1AQ8N9B8 481 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 UFD1Q92890 307 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 FRMD6Q96NE9 622 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 OR51V1Q9H2C8 321 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 TDP1Q9NUW8 608 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 ING3Q9NXR8 418 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 MIA3Q5JRA6 1907 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 RPN2P04844 631 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 MYL9P24844 172 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 CASP3P42574 277 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 RAB8AP61006 207 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 KCNJ10P78508 379 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 B4GALNT1Q00973 533 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 CSTF1Q05048 431 aaKnown RBP15.4■□□□□ 0.06
PCDH1-203ENST00000394536 CDC73Q6P1J9 531 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 MMAAQ8IVH4 418 aaKnown RBP15.4■□□□□ 0.06
PCDH1-203ENST00000394536 UBTD2Q8WUN7 234 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 IRF7Q92985 503 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 XKR8Q9H6D3 395 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 SPATA2Q9UM82 520 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 A0A1W2PQ09 198 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 GPR37L1O60883 481 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 CLTBP09497 229 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 SPNP16150 400 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 IMPA1P29218 277 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 HOXA9P31269 272 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 CLCNKAP51800 687 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 KCNC3Q14003 757 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 METTL2BQ6P1Q9 378 aaKnown RBP15.39■□□□□ 0.05
PCDH1-203ENST00000394536 GDPD3Q7L5L3 318 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 CCDC116Q8IYX3 515 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 MFSD4AQ8N468 514 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 OR5D16Q8NGK9 328 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 OR8J1Q8NGP2 316 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 MACROD1Q9BQ69 325 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 BHLHE41Q9C0J9 482 aaPredicted RBP15.39■□□□□ 0.05
PCDH1-203ENST00000394536 PIKFYVEQ9Y2I7 2098 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 NDUFB5O43674 189 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 HSD3B1P14060 373 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 TGM1P22735 817 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 HSD3B2P26439 372 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 SNRPD2P62316 118 aaKnown RBP15.39■□□□□ 0.05
PCDH1-203ENST00000394536 AGAP6Q5VW22 663 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 LAX1Q8IWV1 398 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 UXS1Q8NBZ7 420 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 ADAMTS15Q8TE58 950 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 AGAP4Q96P64 663 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 GPSM3Q9Y4H4 160 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 PRR23D1E9PI22 279 aaPredicted RBP15.39■□□□□ 0.05
PCDH1-203ENST00000394536 PRR23D2P0DMB1 279 aaPredicted RBP15.39■□□□□ 0.05
PCDH1-203ENST00000394536 BMP7P18075 431 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 LRRC26Q2I0M4 334 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 WSCD2Q2TBF2 565 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 SLC35F1Q5T1Q4 408 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 MZT2AQ6P582 158 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 GAREM2Q75VX8 874 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 C11orf24Q96F05 449 aaPredicted RBP15.39■□□□□ 0.05
PCDH1-203ENST00000394536 CDADC1Q9BWV3 514 aa15.39■□□□□ 0.05
PCDH1-203ENST00000394536 MAP4K2Q12851 820 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 CDKL4Q5MAI5 379 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF671Q8TAW3 534 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 OR8D1Q8WZ84 308 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 ZFP3Q96NJ6 502 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 TM9SF2Q99805 663 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 SLC46A2Q9BY10 475 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 MGAT4BQ9UQ53 548 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 CCL26Q9Y258 94 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 RNASET2O00584 256 aaKnown RBP15.38■□□□□ 0.05
PCDH1-203ENST00000394536 LAG3P18627 525 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 PNLIPRP1P54315 467 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF385BQ569K4 471 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 OR2G6Q5TZ20 316 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 BHLHB9Q6PI77 547 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 FAM92BQ6ZTR7 304 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 VN1R5Q7Z5H4 357 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 OR4K5Q8NGD3 323 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 TMEM184CQ9NVA4 438 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 P2RX2Q9UBL9 471 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 HSPB11Q9Y547 144 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 LCTP09848 1927 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 NOTOA8MTQ0 251 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 LATO43561 262 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 CYP17A1P05093 508 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 EPHX1P07099 455 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 UQCRC2P22695 453 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 KLHL22Q53GT1 634 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 LAIR2Q6ISS4 152 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 RBM45Q8IUH3 476 aaKnown RBP15.38■□□□□ 0.05
PCDH1-203ENST00000394536 OR8H1Q8NGG4 311 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 NUS1Q96E22 293 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 IRF2BPLQ9H1B7 796 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 NLKQ9UBE8 527 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 UGT2A1Q9Y4X1 527 aa15.38■□□□□ 0.05
PCDH1-203ENST00000394536 FAM170BA6NMN3 283 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 M0R082 166 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms