RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 ACSL5Q9ULC5 683 aa13.96□□□□□ -0.17
CDH16-202ENST00000394055 ICKQ9UPZ9 632 aa13.96□□□□□ -0.17
CDH16-202ENST00000394055 PRELID1Q9Y255 219 aa13.96□□□□□ -0.17
CDH16-202ENST00000394055 KLHL20Q9Y2M5 609 aa13.96□□□□□ -0.17
CDH16-202ENST00000394055 TMA7Q9Y2S6 64 aaKnown RBP13.96□□□□□ -0.17
CDH16-202ENST00000394055 J3QRK9 145 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 DPM1O60762 260 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 HSD17B2P37059 387 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 SSR2P43308 183 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 MICAQ29983 383 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 PROX2Q3B8N5 592 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 ITPRIPL2Q3MIP1 535 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 OLIG3Q7RTU3 272 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 NLGN4XQ8N0W4 816 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 OR2A1Q8NGT9 310 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 OR5P2Q8WZ92 322 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 RGMAQ96B86 450 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 TMEM19Q96HH6 336 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 PCBD2Q9H0N5 130 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 KLHL31Q9H511 634 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 PRDM8Q9NQV8 689 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 TBC1D23Q9NUY8 699 aa13.96□□□□□ -0.18
CDH16-202ENST00000394055 TRNAU1APQ9NX07 287 aaKnown RBP13.96□□□□□ -0.18
CDH16-202ENST00000394055 RECKO95980 971 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 IFNA14P01570 189 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 LCKP06239 509 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 CEACAM5P06731 702 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 ALPPL2P10696 532 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 CXCR4P61073 352 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 CTF1Q16619 201 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 REEP3Q6NUK4 255 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 C6orf120Q7Z4R8 191 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 P3H2Q8IVL5 708 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 PIP5K1AQ99755 562 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 CENPOQ9BU64 300 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 AICDAQ9GZX7 198 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 NKX2-4Q9H2Z4 354 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 THSD1Q9NS62 852 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 SIRT3Q9NTG7 399 aaPredicted RBP13.95□□□□□ -0.18
CDH16-202ENST00000394055 RABL2AQ9UBK7 228 aaPredicted RBP13.95□□□□□ -0.18
CDH16-202ENST00000394055 DNMT3AQ9Y6K1 912 aaPredicted RBP13.95□□□□□ -0.18
CDH16-202ENST00000394055 AP1M2Q9Y6Q5 423 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 MYO10Q9HD67 2058 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 GADD45GO95257 159 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 IGFALSP35858 605 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 XCR1P46094 333 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 RAB28P51157 221 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 BMXP51813 675 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 SAXO2Q658L1 398 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 ZNF776Q68DI1 518 aaPredicted RBP13.95□□□□□ -0.18
CDH16-202ENST00000394055 HMGN2P46Q86SG4 172 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 ARMC8Q8IUR7 673 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 RAB42Q8N4Z0 105 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 ANKK1Q8NFD2 765 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 PROX1Q92786 737 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 NEURL3Q96EH8 262 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 DPH7Q9BTV6 452 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 RSPO3Q9BXY4 272 aaPredicted RBP13.95□□□□□ -0.18
CDH16-202ENST00000394055 ACER3Q9NUN7 267 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 SLC6A14Q9UN76 642 aa13.95□□□□□ -0.18
CDH16-202ENST00000394055 SNRNP200O75643 2136 aaKnown RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 K7EQS6 105 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 TOR1BO14657 336 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 ITGA2P17301 1181 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 ENDOUP21128 410 aaKnown RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 MVKQ03426 396 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 OCA2Q04671 838 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 PRDX1Q06830 199 aaKnown RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDH16-202ENST00000394055 TMEM236Q5W0B7 351 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 ZNF793Q6ZN11 406 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 NUDT18Q6ZVK8 323 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 ANKRD13BQ86YJ7 626 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 CCDC103Q8IW40 242 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 OR52E1Q8NGJ3 308 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 OR5D16Q8NGK9 328 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 VANGL1Q8TAA9 524 aaPredicted RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 PHF10Q8WUB8 498 aaKnown RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 SLC17A9Q9BYT1 436 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 ACOT13Q9NPJ3 140 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 DZANK1Q9NVP4 752 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 PCDHGB1Q9Y5G3 927 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 TBC1D3DA0A087WVF3 549 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 TBC1D3IA0A087WXS9 549 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 TBC1D3EA0A087X179 549 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 TBC1D3KA0A087X1G2 549 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 TBC1D3FA6NER0 549 aaPredicted RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 TBC1D3LB9A6J9 549 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 C4orf51C9J302 202 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 RNGTTO60942 597 aaKnown RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 IFNW1P05000 195 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 TBC1D3HP0C7X1 549 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 CDH3P22223 829 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 C21orf33P30042 268 aaPredicted RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 GGT2P36268 569 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 BCL6P41182 706 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 EIF2DP41214 584 aaKnown RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 VBP1P61758 197 aa13.94□□□□□ -0.18
CDH16-202ENST00000394055 RPS21P63220 83 aaKnown RBP13.94□□□□□ -0.18
CDH16-202ENST00000394055 PPP2R2DQ66LE6 453 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms