RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 ARMC8Q8IUR7 673 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 HS3ST5Q8IZT8 346 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 FAM46DQ8NEK8 389 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 ZNF347Q96SE7 839 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 TOR3AQ9H497 397 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 EPB41L1Q9H4G0 881 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 CXorf56Q9H5V9 222 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 REEP1Q9H902 201 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 PHF11Q9UIL8 331 aa16.34■□□□□ 0.21
RPAIN-203ENST00000381209 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 C5orf58C9J3I9 102 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 ZSCAN9O15535 394 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 TFAP2AP05549 437 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 PABPC4LP0CB38 370 aaKnown RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 NME1P15531 152 aaKnown RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 TUBA4AP68366 448 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 SIM2Q14190 667 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 ZIK1Q3SY52 487 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 RNF220Q5VTB9 566 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 C18orf63Q68DL7 685 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 ABHD13Q7L211 337 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 SIX5Q8N196 739 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 ZNF655Q8N720 491 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 ZNF555Q8NEP9 628 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 TSPAN14Q8NG11 270 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 SPPL2AQ8TCT8 520 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 RERGQ96A58 199 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 CLDN23Q96B33 292 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 CNRIP1Q96F85 164 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 MBOAT4Q96T53 435 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 EPYCQ99645 322 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 UCK1Q9HA47 277 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 THSD1Q9NS62 852 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 EVA1BQ9NVM1 165 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 FAM118AQ9NWS6 357 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 SAMHD1Q9Y3Z3 626 aaKnown RBP16.33■□□□□ 0.2
RPAIN-203ENST00000381209 ORC6Q9Y5N6 252 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 U3KQV3 271 aa16.33■□□□□ 0.2
RPAIN-203ENST00000381209 SMIM31A0A1B0GVY4 71 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 TRIM64A6NGJ6 449 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 GLOD5A6NK44 160 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 TLR4O00206 839 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 SH3BP5O60239 455 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 HS6ST1O60243 411 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 PRKRAO75569 313 aaKnown RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 ERAL1O75616 437 aaKnown RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 PDE9AO76083 593 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 TFPTP0C1Z6 253 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 NR2F6P10588 404 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 ITGA2P17301 1181 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 MPIP34949 423 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 BUD31P41223 144 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 LSSP48449 732 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 ANXA11P50995 505 aaKnown RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 ARMC6Q6NXE6 501 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 TNFAIP8L2Q6P589 184 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 ISLR2Q6UXK2 745 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 GKN2Q86XP6 184 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 SFTPA2Q8IWL1 248 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 SAMD14Q8IZD0 417 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 SUN3Q8TAQ9 357 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 SLC38A5Q8WUX1 472 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 GEMIN6Q8WXD5 167 aaKnown RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 SLC35G5Q96KT7 338 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 MAPKAP1Q9BPZ7 522 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 ZCCHC3Q9NUD5 404 aaKnown RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 DNAAF2Q9NVR5 837 aaKnown RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 TUBA8Q9NY65 449 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 TMEFF2Q9UIK5 374 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 PCDHGB3Q9Y5G1 929 aa16.32■□□□□ 0.2
RPAIN-203ENST00000381209 SPTBN5Q9NRC6 3674 aaKnown RBP16.32■□□□□ 0.2
RPAIN-203ENST00000381209 TMEM247A6NEH6 219 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 WASHC1A8K0Z3 465 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 H0YGG7 62 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 HMGN4O00479 90 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 ADAMDEC1O15204 470 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 P2RX6O15547 441 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 B3GALT2O43825 422 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 CLIC3O95833 236 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 C9P02748 559 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 OPN1SWP03999 348 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 NELFEP18615 380 aaKnown RBP16.31■□□□□ 0.2
RPAIN-203ENST00000381209 PRKACGP22612 351 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 NR1H2P55055 460 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 ARF3P61204 181 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-203ENST00000381209 RPS26P62854 115 aaKnown RBP16.31■□□□□ 0.2
RPAIN-203ENST00000381209 TNFRSF17Q02223 184 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 PPP1R8Q12972 351 aaKnown RBP16.31■□□□□ 0.2
RPAIN-203ENST00000381209 TP53BP2Q13625 1128 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-203ENST00000381209 FOXB2Q5VYV0 432 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 SLC36A4Q6YBV0 504 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 CEP68Q76N32 757 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 TSEN54Q7Z6J9 526 aaKnown RBP16.31■□□□□ 0.2
RPAIN-203ENST00000381209 ZNF786Q8N393 782 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 OR56A1Q8NGH5 318 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 TMEM19Q96HH6 336 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 ZNF681Q96N22 645 aa16.31■□□□□ 0.2
RPAIN-203ENST00000381209 SOX17Q9H6I2 414 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-203ENST00000381209 RUBCNLQ9H714 662 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms