RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SEMA3DO95025 777 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 SCELO95171 688 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ESRRBO95718 433 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 GBAP04062 536 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 IFNA16P05015 189 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ENO1P06733 434 aaKnown RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ITGAMP11215 1152 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 CREB1P16220 341 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ALDH3A1P30838 453 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 BSGP35613 385 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 TSFMP43897 325 aaKnown RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 HTR6P50406 440 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 HSD17B7P56937 341 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 AP2B1P63010 937 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ASPHQ12797 758 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 STX4Q12846 297 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 PCLAFQ15004 111 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 EXT1Q16394 746 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 C10orf62Q5T681 223 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 LIPMQ5VYY2 423 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 PLAG1Q6DJT9 500 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 SCIMPQ6UWF3 145 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ISLR2Q6UXK2 745 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 FRMD7Q6ZUT3 714 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 GPR180Q86V85 440 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 NUDT13Q86X67 352 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 HPS6Q86YV9 775 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 TREML1Q86YW5 311 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 SCUBE1Q8IWY4 988 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 IQCKQ8N0W5 287 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ZCCHC7Q8N3Z6 543 aaKnown RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ZADH2Q8N4Q0 377 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 SIRT6Q8N6T7 355 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 TCP10LQ8TDR4 215 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 AGAP11Q8TF27 550 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 KCNA7Q96RP8 456 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 WDR77Q9BQA1 342 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 MRPL1Q9BYD6 325 aaKnown RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 SHCBP1LQ9BZQ2 653 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 EPS8L2Q9H6S3 715 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 KCNK13Q9HB14 408 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 ZBTB20Q9HC78 741 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 PNO1Q9NRX1 252 aaKnown RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 LYARQ9NX58 379 aaKnown RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 AHSPQ9NZD4 102 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 KCMF1Q9P0J7 381 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 SENP1Q9P0U3 644 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 LUZP4Q9P127 313 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 PLEKHB1Q9UF11 243 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-202ENST00000380747 PHF11Q9UIL8 331 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 TIMM22Q9Y584 194 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 SEC16AO15027 2179 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 A0A0A6YYD5 115 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 TCRBV16S1A1N1A0A5B0 115 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 ARHGAP10A1A4S6 786 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 SAGE2PA6NJ88 616 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 TGFBR3LH3BV60 316 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 UBFD1O14562 309 aaKnown RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 CTIFO43310 598 aaKnown RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 TMPRSS11DO60235 418 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 TRIM13O60858 407 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 LDB3O75112 727 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 ULK1O75385 1050 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 MYO1DO94832 1006 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 KLK1P06870 262 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 FAM58BPP0C7Q3 252 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 MYZAPP0CAP1 466 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 CHN1P15882 459 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 TNNI3P19429 210 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 PPP2R1BP30154 601 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 TLX1P31314 330 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 ARFIP1P53367 373 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 HNRNPH2P55795 449 aaKnown RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 SLC26A5P58743 744 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 NAA20P61599 178 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 TNFRSF17Q02223 184 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 ID2Q02363 134 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 CRB2Q5IJ48 1285 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 CCNYL2Q5T2Q4 361 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 B3GNTL1Q67FW5 361 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 C18orf63Q68DL7 685 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 FCRLBQ6BAA4 426 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 JMJD6Q6NYC1 403 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 LRIG3Q6UXM1 1119 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 RIPOR1Q6ZS17 1223 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 CROCCP2Q86T23 111 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 RBMXL3Q8N7X1 1067 aaKnown RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 M1APQ8TC57 530 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 SREK1Q8WXA9 508 aaKnown RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 PSMF1Q92530 271 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 MECRQ9BV79 373 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 GATA5Q9BWX5 397 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 ZNF717Q9BY31 904 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 ALOXE3Q9BYJ1 711 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 RUBCNLQ9H714 662 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 RPF2Q9H7B2 306 aaKnown RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 DDX31Q9H8H2 851 aaKnown RBP8.64□□□□□ -1.03
HMGN1-202ENST00000380747 WDR41Q9HAD4 459 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 BRF2Q9HAW0 419 aa8.64□□□□□ -1.03
HMGN1-202ENST00000380747 RRAGDQ9NQL2 400 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms