RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 NLRC5Q86WI3 1866 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 ZDHHC21Q8IVQ6 265 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC13A3Q8WWT9 602 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SIPA1Q96FS4 1042 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 ABHD1Q96SE0 405 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 PIGUQ9H490 435 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 CCDC86Q9H6F5 360 aaKnown RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 LDAHQ9H6V9 325 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC25A19Q9HC21 320 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 GLOD4Q9HC38 313 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 NDUFB11Q9NX14 153 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 LYARQ9NX58 379 aaKnown RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 DPP7Q9UHL4 492 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 HSF4Q9ULV5 492 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SAMD4AQ9UPU9 718 aaKnown RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 PCDHB1Q9Y5F3 818 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 CDH10Q9Y6N8 788 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SESN1Q9Y6P5 492 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 CHD5Q8TDI0 1954 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SH3D21A4FU49 640 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 PRR23AA6NEV1 266 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC30A4O14863 429 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SMAD6O43541 496 aaKnown RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 ZNF254O75437 659 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 IL1AP01583 271 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 TK1P04183 234 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 G6PDP11413 515 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 DDCP20711 480 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 RORCP51449 518 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 GEMP55040 296 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 PUM1Q14671 1186 aaKnown RBP eCLIP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 MICAQ29983 383 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC39A12Q504Y0 691 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 MPP7Q5T2T1 576 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 GARNL3Q5VVW2 1013 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 TPGS2Q68CL5 300 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 TYW3Q6IPR3 259 aaKnown RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 METAP1DQ6UB28 335 aaPredicted RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 RSPO2Q6UXX9 243 aaPredicted RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 BHLHA9Q7RTU4 235 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 TSEN54Q7Z6J9 526 aaKnown RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 PIM3Q86V86 326 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 C10orf53Q8N6V4 93 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 LINC01465Q8N7H1 131 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 PLA2G15Q8NCC3 412 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 OR4C15Q8NGM1 316 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SPATA22Q8NHS9 363 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 CREB3L1Q96BA8 519 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 ZBED6CLQ96FA7 236 aaPredicted RBP6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 C7orf34Q96L11 122 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SENP8Q96LD8 212 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 KCNS3Q9BQ31 491 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 BEX2Q9BXY8 128 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC6A13Q9NSD5 602 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 CATSPERZQ9NTU4 200 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 C1orf109Q9NX04 203 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 GLS2Q9UI32 602 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 RIMKLBQ9ULI2 386 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 NUP205Q92621 2012 aa6.38□□□□□ -1.39
CDKAL1-202ENST00000378610 A0A0G2JPF8 293 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 hCG_1809904A0A1W2PP81 198 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 A0A1W2PPE2 198 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 A0A1W2PR64 198 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 A8MXK9 166 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 HNRNPCL3B7ZW38 293 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 E5RI56 91 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 GNGT2O14610 69 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 CHP2O43745 196 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 PEX11BO96011 259 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 HMGN1P05114 100 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 IL6P05231 212 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 HNRNPCL4P0DMR1 293 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 IFI30P13284 250 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 ARSBP15848 533 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 GPC1P35052 558 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 BAATQ14032 418 aaPredicted RBP6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 HABP4Q5JVS0 413 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 PLPPR4Q7Z2D5 763 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 ACOT1Q86TX2 421 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 COMMD7Q86VX2 200 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 SPATA2LQ8IUW3 424 aaPredicted RBP6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 ZBTB8OSQ8IWT0 167 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 OR4F6Q8NGB9 312 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 OR6J1Q8NGC5 347 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 PRMT6Q96LA8 375 aaPredicted RBP6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 ZSWIM3Q96MP5 696 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 RBP7Q96R05 134 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 SPXQ9BT56 116 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 TDRD3Q9H7E2 651 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 TM7SF3Q9NS93 570 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 LPAR3Q9UBY5 353 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 PHF11Q9UIL8 331 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 GMEB2Q9UKD1 530 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 HSPB11Q9Y547 144 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 NPTNQ9Y639 398 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 PLXNA3P51805 1871 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 CIB4A0PJX0 185 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 PCDH17O14917 1159 aa6.37□□□□□ -1.39
CDKAL1-202ENST00000378610 MATN3O15232 486 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms