RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 TRIM2Q9C040 744 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 DUX4Q9UBX2 424 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 CSTAP01040 98 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 NNATQ16517 81 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 PROKR2Q8NFJ6 384 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 PSMA8Q8TAA3 256 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 UFD1Q92890 307 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 PDFQ9HBH1 243 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 AMBNQ9NP70 447 aa20.23■□□□□ 0.83
SKI-201ENST00000378536 AIREO43918 545 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 TXNL4AP83876 142 aaKnown RBP20.22■□□□□ 0.83
SKI-201ENST00000378536 Q6ZNB5 142 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 GAL3ST3Q96A11 431 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 GPER1Q99527 375 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 ACPTQ9BZG2 426 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 CXorf21Q9HAI6 301 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 POT1Q9NUX5 634 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 ENDOUP21128 410 aaKnown RBP20.22■□□□□ 0.83
SKI-201ENST00000378536 CCR2P41597 374 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 ZNF551Q7Z340 670 aaPredicted RBP20.22■□□□□ 0.83
SKI-201ENST00000378536 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.22■□□□□ 0.831e-6■■■□□ 15.6
SKI-201ENST00000378536 PKMYT1Q99640 499 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 BTBD3Q9Y2F9 522 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 SMAD4Q13485 552 aaKnown RBP20.22■□□□□ 0.83
SKI-201ENST00000378536 NSDHLQ15738 373 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 OR52N2Q8NGI0 321 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 CCM2LQ9NUG4 571 aaPredicted RBP20.22■□□□□ 0.83
SKI-201ENST00000378536 POLR2AP24928 1970 aaKnown RBP20.22■□□□□ 0.83
SKI-201ENST00000378536 NPIPA5E9PKD4 350 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 GPR37L1O60883 481 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 CLEC3AO75596 197 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 OR52P1PQ8NH57 321 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 GNPDA2Q8TDQ7 276 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 NPIPA1Q9UND3 350 aa20.22■□□□□ 0.83
SKI-201ENST00000378536 ZNF99A8MXY4 864 aaPredicted RBP20.21■□□□□ 0.83
SKI-201ENST00000378536 PAX7P23759 505 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 SWT1Q5T5J6 900 aaKnown RBP20.21■□□□□ 0.83
SKI-201ENST00000378536 OGFOD2Q6N063 350 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 ZBTB46Q86UZ6 589 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 PLEKHA1Q9HB21 404 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 ABCB10Q9NRK6 738 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 HSDL2Q6YN16 418 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 YTHDF1Q9BYJ9 559 aaKnown RBP20.21■□□□□ 0.83
SKI-201ENST00000378536 PCDHGB1Q9Y5G3 927 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 PPP6CO00743 305 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 HCRTR2O43614 444 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 AKAP8O43823 692 aaKnown RBP20.21■□□□□ 0.83
SKI-201ENST00000378536 CER1O95813 267 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 CHRM5P08912 532 aaPredicted RBP20.21■□□□□ 0.83
SKI-201ENST00000378536 DNM1P34Q6PK57 102 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 GATSQ8NAP1 163 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 OR6C4Q8NGE1 309 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 DOK4Q8TEW6 326 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 TSSK6Q9BXA6 273 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 CAPN3P20807 821 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 RORAP35398 523 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 LAPTM4AQ15012 233 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 CLEC14AQ86T13 490 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 OR5L2Q8NGL0 311 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 TMEM234Q8WY98 164 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 PIP5K1AQ99755 562 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 SLC6A17Q9H1V8 727 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 TBC1D17Q9HA65 648 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 C5AR2Q9P296 337 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 DDCP20711 480 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 RPS15P62841 145 aaKnown RBP20.21■□□□□ 0.83
SKI-201ENST00000378536 NKX3-2P78367 333 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 ZNF846Q147U1 533 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 ZSWIM7Q19AV6 140 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 KLHL36Q8N4N3 616 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 THAP3Q8WTV1 239 aaPredicted RBP20.21■□□□□ 0.83
SKI-201ENST00000378536 STON2Q8WXE9 905 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 ECHDC3Q96DC8 303 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 METTL2AQ96IZ6 378 aaKnown RBP20.21■□□□□ 0.83
SKI-201ENST00000378536 TBX5Q99593 518 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 EPHX3Q9H6B9 360 aa20.21■□□□□ 0.83
SKI-201ENST00000378536 HAT1O14929 419 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 SOX14O95416 240 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 SDC1P18827 310 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 SCN4AP35499 1836 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 ETFAP13804 333 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 C4BPBP20851 252 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 SLC45A3Q96JT2 553 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 KCNK12Q9HB15 430 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 SLC9B1P1A6NJY1 282 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 PRRT4C9JH25 899 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 BLOC1S5-TXNDC5H3BN57 136 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 PSMB5P28074 263 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 SLC6A6P31641 620 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 COL9A2Q14055 689 aaPredicted RBP20.2■□□□□ 0.82
SKI-201ENST00000378536 UGT3A2Q3SY77 523 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 DDI2Q5TDH0 399 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 KIAA1614Q5VZ46 1190 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 ADIPOR2Q86V24 386 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 OR2L8Q8NGY9 312 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 C9orf43Q8TAL5 461 aaPredicted RBP20.2■□□□□ 0.82
SKI-201ENST00000378536 UBASH3BQ8TF42 649 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 TRNT1Q96Q11 434 aaKnown RBP20.2■□□□□ 0.82
SKI-201ENST00000378536 PCDHB14Q9Y5E9 798 aa20.2■□□□□ 0.82
SKI-201ENST00000378536 LINC01565O15544 149 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms