RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 ZNF852Q6ZMS4 543 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 CBLL1Q75N03 491 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 TRMT11Q7Z4G4 463 aaKnown RBP16.35■□□□□ 0.21
TRIM27-201ENST00000377194 LRRC56Q8IYG6 542 aaPredicted RBP16.35■□□□□ 0.21
TRIM27-201ENST00000377194 NAGSQ8N159 534 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 ZNF675Q8TD23 568 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 COQ8BQ96D53 544 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 NUS1Q96E22 293 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 METTL2AQ96IZ6 378 aaKnown RBP16.35■□□□□ 0.21
TRIM27-201ENST00000377194 FAM129BQ96TA1 746 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 OR51B5Q9H339 312 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 GPR83Q9NYM4 423 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 ZNF451Q9Y4E5 1061 aa16.35■□□□□ 0.21
TRIM27-201ENST00000377194 TMEM229AB2RXF0 380 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 ZNF197O14709 1029 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 PCDH7O60245 1069 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 PAPLNO95428 1278 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 ADH1CP00326 375 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 PTHP01270 115 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 ITGB7P26010 798 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 TBCEQ15813 527 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 IQCCQ4KMZ1 466 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 ARMCX4Q5H9R4 360 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 TJAP1Q5JTD0 557 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 C2orf73Q8N5S3 287 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 WFIKKN2Q8TEU8 576 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 GGHQ92820 318 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 KCNC2Q96PR1 638 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 PITX2Q99697 317 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 PSORS1C1Q9UIG5 152 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 RABL2BQ9UNT1 228 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 GRIP1Q9Y3R0 1128 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 M0R129 80 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 ZNF780AO75290 641 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 GCM2O75603 506 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 POP7O75817 140 aaKnown RBP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 KLHL18O94889 574 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 STSP08842 583 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 ADRB3P13945 408 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 ASMTP46597 345 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 FCHO2Q0JRZ9 810 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 RGNQ15493 299 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 SPIN4Q56A73 249 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 PAMR1Q6UXH9 720 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 FAM83HQ6ZRV2 1179 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 EIF3MQ7L2H7 374 aaKnown RBP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 CAMKMTQ7Z624 323 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 NPAS3Q8IXF0 933 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 LSMEM1Q8N8F7 131 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 TPD52L3Q96J77 140 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 SGPP1Q9BX95 441 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 THUMPD1Q9NXG2 353 aaKnown RBP16.34■□□□□ 0.21
TRIM27-201ENST00000377194 KCNN3Q9UGI6 736 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 BTNL2Q9UIR0 455 aa16.34■□□□□ 0.21
TRIM27-201ENST00000377194 HEPACAM2A8MVW5 462 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 SNX4O95219 450 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 PIK3CBP42338 1070 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 TGM4P49221 684 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 HBA1P69905 142 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 ERICH5Q6P6B1 374 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 COMMD6Q7Z4G1 85 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 FBXO15Q8NCQ5 510 aaPredicted RBP16.33■□□□□ 0.21
TRIM27-201ENST00000377194 OR9A1PQ8NGU1 263 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 WDR48Q8TAF3 677 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 GPR151Q8TDV0 419 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 CCDC120Q96HB5 630 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 IL17FQ96PD4 163 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 TEKT2Q9UIF3 430 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 RPS6KA6Q9UK32 745 aa16.33■□□□□ 0.21
TRIM27-201ENST00000377194 PIPSLA2A3N6 862 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 LZTS3O60299 673 aaPredicted RBP16.33■□□□□ 0.2
TRIM27-201ENST00000377194 ITGA2P17301 1181 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 MVDP53602 400 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 PPIGQ13427 754 aaKnown RBP eCLIP16.33■□□□□ 0.24e-7■□□□□ 9.7
TRIM27-201ENST00000377194 FAM78AQ5JUQ0 283 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 COX20Q5RI15 118 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 C11orf96Q7Z7L8 435 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 PLA2G15Q8NCC3 412 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 TMCO6Q96DC7 493 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 RIPOR3Q96MK2 946 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 REEP1Q9H902 201 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 ATP13A2Q9NQ11 1180 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 PLAGL1Q9UM63 463 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 TRANK1O15050 2925 aa16.33■□□□□ 0.2
TRIM27-201ENST00000377194 A0A1W2PQ09 198 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 SMLR1H3BR10 107 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 POLR1CO15160 346 aaPredicted RBP16.32■□□□□ 0.2
TRIM27-201ENST00000377194 SLITRK5O94991 958 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 CDK1P06493 297 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 C1GALT1C1LP0DN25 315 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 HOXB6P17509 224 aaKnown RBP16.32■□□□□ 0.2
TRIM27-201ENST00000377194 ACADLP28330 430 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 SOX6P35712 828 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 VEZF1Q14119 521 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 EFR3AQ14156 821 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 ZNF234Q14588 700 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 PRSS53Q2L4Q9 553 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 MPEG1Q2M385 716 aa16.32■□□□□ 0.2
TRIM27-201ENST00000377194 PXDC1Q5TGL8 231 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms