RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TCEAL1Q15170 157 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 ERI1Q8IV48 349 aaKnown RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 NINJ1Q92982 152 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 TOE1Q96GM8 510 aaKnown RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 PROM1O43490 865 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 SLC2A2P11168 524 aaPredicted RBP13.04□□□□□ -0.32
GPC6-201ENST00000377047 FDXRP22570 491 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 KCNC4Q03721 635 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 ECH1Q13011 328 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 FAM189A2Q15884 450 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 GXYLT1Q4G148 440 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 KLHDC8AQ8IYD2 350 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 C7orf57Q8NEG2 295 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 OR5T2Q8NGG2 359 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 ADAMTS18Q8TE60 1221 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 TMEM41AQ96HV5 264 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 TEX13CA0A0J9YWL9 993 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 OR14I1A6ND48 311 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 BCKDHAP12694 445 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 DCDC1P59894 354 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 PACRGLQ8N7B6 248 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 NLGN4YQ8NFZ3 816 aaPredicted RBP13.04□□□□□ -0.32
GPC6-201ENST00000377047 SHKBP1Q8TBC3 707 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 CCDC107Q8WV48 283 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 MT-ND5P03915 603 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 SLC15A1P46059 708 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 SPERTQ8NA61 448 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 FAM129BQ96TA1 746 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 TMEM184CQ9NVA4 438 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 SARDHQ9UL12 918 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 KAT6AQ92794 2004 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 DRD2P14416 443 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 GPR143P51810 404 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 DSG2Q14126 1118 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 GRIN2CQ14957 1233 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 CCSAPQ6IQ19 270 aaPredicted RBP13.04□□□□□ -0.32
GPC6-201ENST00000377047 NANOGP8Q6NSW7 305 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 RABEPKQ7Z6M1 372 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 SNX29P2Q8IUI4 249 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 ACOT12Q8WYK0 555 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 TCEAL4Q96EI5 215 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 SCGB3A2Q96PL1 93 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 NANOGQ9H9S0 305 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 PCDHB16Q9NRJ7 776 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 PARPBPQ9NWS1 579 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 ATXN7L1Q9ULK2 861 aaPredicted RBP13.04□□□□□ -0.32
GPC6-201ENST00000377047 MYH1P12882 1939 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 MAPK3P27361 379 aaPredicted RBP13.04□□□□□ -0.32
GPC6-201ENST00000377047 C6orf120Q7Z4R8 191 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 SCD5Q86SK9 330 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 MRPL43Q8N983 215 aaKnown RBP13.04□□□□□ -0.32
GPC6-201ENST00000377047 HLA-CQ95604 372 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 LIPT1Q9Y234 373 aa13.04□□□□□ -0.32
GPC6-201ENST00000377047 DPPA5A6NC42 116 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 A6NL46 340 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 SLC35E2BP0CK96 405 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 EN2P19622 333 aaPredicted RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 AP2S1P53680 142 aaPredicted RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 KIAA1614Q5VZ46 1190 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 OR51G2Q8NGK0 314 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 MOCOSQ96EN8 888 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 TRPV4Q9HBA0 871 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 APOC1P02654 83 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 GNG2P59768 71 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 DLX2Q07687 328 aaPredicted RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 OR51A7Q8NH64 312 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 GPRC5BQ9NZH0 403 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 VSTM2BA6NLU5 285 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 A8MVJ9 347 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 SOCS2O14508 198 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 ARSFP54793 590 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 GINS1Q14691 196 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 IER5LQ5T953 404 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 MANEALQ5VSG8 457 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 TOR1AIP2Q8NFQ8 470 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 OR5AR1Q8NGP9 310 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 OR14L1PQ8NHC6 308 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 RADILQ96JH8 1075 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 HPF1Q9NWY4 346 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 NPIPB15A6NHN6 443 aaPredicted RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 CDRT1O95170 752 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 IFNA21P01568 189 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 ALDOAP04075 364 aaKnown RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 ACY1Q03154 408 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 FGL2Q14314 439 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 TOMM5Q8N4H5 51 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 LPAR4Q99677 370 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 C14orf166Q9Y224 244 aaKnown RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 FARSAQ9Y285 508 aaKnown RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 HLA-DPB1P04440 258 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 TAS2R43P59537 309 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 TMEM151BQ8IW70 566 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 FOXRED2Q8IWF2 684 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
GPC6-201ENST00000377047 CEP76Q8TAP6 659 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 GAL3ST3Q96A11 431 aa13.03□□□□□ -0.32
GPC6-201ENST00000377047 ZFYVE21Q9BQ24 234 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms