RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 B3GNT6Q6ZMB0 384 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 SLC29A4Q7RTT9 530 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 PPM1NQ8N819 430 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 SPATA4Q8NEY3 305 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 OR7G3Q8NG95 312 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 RHEBL1Q8TAI7 183 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 LRRC46Q96FV0 321 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 FBXL20Q96IG2 436 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 SCYL1Q96KG9 808 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 MAPKAP1Q9BPZ7 522 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 LDAHQ9H6V9 325 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 EXO5Q9H790 373 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 DEPPQ9NTK1 212 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 LYARQ9NX58 379 aaKnown RBP13.66□□□□□ -0.22
HDAC6-204ENST00000376643 QPCTLQ9NXS2 382 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 CNIH4Q9P003 139 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 ACOT9Q9Y305 439 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 PCDHGB3Q9Y5G1 929 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 TNPO3Q9Y5L0 923 aaKnown RBP13.66□□□□□ -0.22
HDAC6-204ENST00000376643 IQANK1A0A1B0GTG1 560 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 OR6C76A6NM76 312 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 FAM90A27PA6NNH2 459 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 CXorf49A8MYA2 514 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-204ENST00000376643 TGFB1P01137 390 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 SLC35E2BP0CK96 405 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 PTX3P26022 381 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-204ENST00000376643 MSX1P28360 303 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 SERPINB3P29508 390 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 MAN2A2P49641 1150 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 TNFRSF17Q02223 184 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 PMPCAQ10713 525 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 SLAMF1Q13291 335 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 CDSNQ15517 529 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 GXYLT1Q4G148 440 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 PIGGQ5H8A4 983 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 C10orf62Q5T681 223 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-204ENST00000376643 ZNF793Q6ZN11 406 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 NCCRP1Q6ZVX7 275 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-204ENST00000376643 TRILQ7L0X0 811 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 ISCA2Q86U28 154 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 GPR180Q86V85 440 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 MYLK4Q86YV6 388 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-204ENST00000376643 ST13P4Q8IZP2 240 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-204ENST00000376643 ESAMQ96AP7 390 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 SENP5Q96HI0 755 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-204ENST00000376643 ZNF559Q9BR84 538 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 ACTR8Q9H981 624 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 ITGB1BP2Q9UKP3 347 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 ACAD8Q9UKU7 415 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 EDARQ9UNE0 448 aa13.65□□□□□ -0.22
HDAC6-204ENST00000376643 OR10H2O60403 315 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 PRAMEF4O60810 478 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 GFAPP14136 432 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 ALOX15P16050 662 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-204ENST00000376643 IGFBP2P18065 325 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 GALNSP34059 522 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 ZFP36L2P47974 494 aaKnown RBP13.64□□□□□ -0.23
HDAC6-204ENST00000376643 KCNJ2P63252 427 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 RPP38P78345 283 aaKnown RBP13.64□□□□□ -0.23
HDAC6-204ENST00000376643 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.238e-7■■■■□ 21.6
HDAC6-204ENST00000376643 SPRED3Q2MJR0 410 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 ZNF750Q32MQ0 723 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 SLC25A35Q3KQZ1 300 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 KBTBD12Q3ZCT8 623 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 FBXO48Q5FWF7 155 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 C6orf163Q5TEZ5 329 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 PRAMEF9Q5VWM5 478 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 ADNP2Q6IQ32 1131 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 SPNS3Q6ZMD2 512 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 RNF111Q6ZNA4 994 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 UBE3DQ7Z6J8 389 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 TAGAPQ8N103 731 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 MARVELD2Q8N4S9 558 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 TMEM251Q8N6I4 163 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 OR10Q1Q8NGQ4 319 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 HUS1BQ8NHY5 278 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 ZNF721Q8TF20 911 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 ANKRD9Q96BM1 317 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-204ENST00000376643 SPACA9Q96E40 222 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-204ENST00000376643 ATOH8Q96SQ7 321 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 LIN28AQ9H9Z2 209 aaKnown RBP13.64□□□□□ -0.23
HDAC6-204ENST00000376643 DMRT3Q9NQL9 472 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 PSD3Q9NYI0 1048 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 ATG4BQ9Y4P1 393 aa13.64□□□□□ -0.23
HDAC6-204ENST00000376643 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.64□□□□□ -0.23
HDAC6-204ENST00000376643 TRGV5A0A0B4J1U4 118 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 H0YIV9 168 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 UBXN8O00124 270 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 ZNHIT1O43257 154 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 RAD51CO43502 376 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 FGF17O60258 216 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 PIAS1O75925 651 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 TOXO94900 526 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 ETHE1O95571 254 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 IGKV3-11P04433 115 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 CD1EP15812 388 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 EPORP19235 508 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 POU3F2P20265 443 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-204ENST00000376643 PHBP35232 272 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 MAGEA4P43358 317 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms