RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ZNF707Q96C28 371 aaPredicted RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 ASB8Q9H765 288 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 SEC14L4Q9UDX3 406 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 PLEKHB1Q9UF11 243 aaPredicted RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 OARD1Q9Y530 152 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 MYO15AQ9UKN7 3530 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 ATG2AQ2TAZ0 1938 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 WASHC1A8K0Z3 465 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 TRIM3O75382 744 aaPredicted RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 GCM2O75603 506 aaPredicted RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 PDE9AO76083 593 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 OPN1SWP03999 348 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 LHCGRP22888 699 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 RPS3P23396 243 aaKnown RBP eCLIP12.32□□□□□ -0.44
MSH5-204ENST00000375755 PSMA1P25786 263 aaKnown RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 EVI2BP34910 448 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 PBX2P40425 430 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 OR1E2P47887 323 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 SLC9A3P48764 834 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 WNT3P56703 355 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 SPIBQ01892 262 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 ALDH6A1Q02252 535 aaKnown RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 CHRNA6Q15825 494 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 LCN1P1Q5VSP4 162 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 C22orf39Q6P5X5 142 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 SFTPA1Q8IWL2 248 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 ADGRG2Q8IZP9 1017 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 C9orf62Q8N4C0 152 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 GPR26Q8NDV2 337 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 SELENOMQ8WWX9 145 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 GTPBP3Q969Y2 492 aaKnown RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 SLC25A46Q96AG3 418 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 MSLNLQ96KJ4 702 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 APOLD1Q96LR9 279 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 DOHHQ9BU89 302 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 ACAT2Q9BWD1 397 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 TRIM45Q9H8W5 580 aaPredicted RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 SPHK2Q9NRA0 654 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 STUB1Q9UNE7 303 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 MAPRE3Q9UPY8 281 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 HYKKA2RU49 373 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ADAMDEC1O15204 470 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 YY2O15391 372 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 SCN2BO60939 215 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 IGSF6O95976 241 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 EPB42P16452 691 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ENPP1P22413 925 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ITGB7P26010 798 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 EPHA5P54756 1037 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 RHAGQ02094 409 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 VEZF1Q14119 521 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ZNF77Q15935 545 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 MICAQ29983 383 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 MPP7Q5T2T1 576 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ZBTB37Q5TC79 503 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 CRTC1Q6UUV9 634 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 GDPGP1Q6ZNW5 385 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 PTCHD4Q6ZW05 846 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 C12orf40Q86WS4 652 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 UPRTQ96BW1 309 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ZBED6CLQ96FA7 236 aaPredicted RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 ASIC4Q96FT7 647 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ZSCAN5AQ9BUG6 496 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 EBPLQ9BY08 206 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 FAM126AQ9BYI3 521 aaPredicted RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 CIPCQ9C0C6 399 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 GALNT9Q9HCQ5 603 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ZDHHC4Q9NPG8 344 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 NLKQ9UBE8 527 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 LINC00862A6NCI5 91 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 MSL3P1P0C860 447 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ACPPP15309 386 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 EPORP19235 508 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 APEX1P27695 318 aaKnown RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 CDC42P60953 191 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 MTAPQ13126 283 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 SPHARQ15513 63 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 UGT8Q16880 541 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ATP6V1C2Q8NEY4 427 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 TMEM80Q96HE8 168 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 GFM1Q96RP9 751 aaKnown RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 DCLRE1CQ96SD1 692 aaKnown RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 C2orf16Q68DN1 1984 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 PLXNB3Q9ULL4 1909 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 SH3D21A4FU49 640 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 PRAMEF25A6NGN4 478 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 OTOL1A6NHN0 477 aaPredicted RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 MYL12BO14950 172 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 ENTPD6O75354 484 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 SLC22A5O76082 557 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 AP2A2O94973 939 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 HBQ1P09105 142 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 HLA-EP13747 358 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 MYL12AP19105 171 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 CNR2P34972 360 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 RRAS2P62070 204 aaPredicted RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 PTSQ03393 145 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 MAB21L1Q13394 359 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 NFE2L1Q14494 772 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms