RNA–Protein interactions for RNA: ENST00000372247.6

RNF220-204, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF220, Length 3,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-204ENST00000372247 A0A1W2PRQ8 180 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 ALPPP05187 535 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 CKMP06732 381 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
RNF220-204ENST00000372247 PTBP1P26599 531 aaKnown RBP eCLIP13.12□□□□□ -0.318e-7■■■■□ 19.5
RNF220-204ENST00000372247 CHI3L1P36222 383 aaPredicted RBP13.12□□□□□ -0.31
RNF220-204ENST00000372247 GJA8P48165 433 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 EPHA5P54756 1037 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 C3orf38Q5JPI3 329 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 XKRXQ6PP77 449 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 CD200R1LQ6Q8B3 271 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 NRARPQ7Z6K4 114 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 GDPD1Q8N9F7 314 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 LILRB4Q8NHJ6 448 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 VWCEQ96DN2 955 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 ZC3HAV1LQ96H79 300 aaKnown RBP13.12□□□□□ -0.31
RNF220-204ENST00000372247 YIPF2Q9BWQ6 316 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 PITHD1Q9GZP4 211 aaPredicted RBP13.12□□□□□ -0.31
RNF220-204ENST00000372247 TRIM39Q9HCM9 518 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 SPG21Q9NZD8 308 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 MUTYHQ9UIF7 546 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 M0R129 80 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 PDHA2P29803 388 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 NR4A2P43354 598 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 DGKGP49619 791 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 HYAL2Q12891 473 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 ZNF805Q5CZA5 627 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
RNF220-204ENST00000372247 FOXJ1Q92949 421 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 SLC46A2Q9BY10 475 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 NLNQ9BYT8 704 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 SIRT3Q9NTG7 399 aaPredicted RBP13.12□□□□□ -0.31
RNF220-204ENST00000372247 ZSCAN32Q9NX65 697 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 TAS2R7Q9NYW3 318 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 SF3B6Q9Y3B4 125 aaKnown RBP13.12□□□□□ -0.31
RNF220-204ENST00000372247 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
RNF220-204ENST00000372247 H3BM21 787 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 TEX28O15482 410 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 CTSLP07711 333 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 IL7P13232 177 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 HOXD10P28358 340 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 CDK5Q00535 292 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 ENTPD8Q5MY95 495 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 TMPRSS11AQ6ZMR5 421 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 ZNF517Q6ZMY9 492 aaPredicted RBP13.11□□□□□ -0.31
RNF220-204ENST00000372247 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 CREB3L4Q8TEY5 395 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 SPNS1Q9H2V7 528 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 MIXL1Q9H2W2 232 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 PELI2Q9HAT8 420 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 HCN2Q9UL51 889 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 CMAHPQ9Y471 501 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 MAP4K5Q9Y4K4 846 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 SNX11Q9Y5W9 270 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 TMEM129A0AVI4 362 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 MMP20O60882 483 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 LEFTY1O75610 366 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 IL3P08700 152 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.315e-6■■□□□ 14.2
RNF220-204ENST00000372247 RCVRNP35243 200 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 TPBGQ13641 420 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 CLPPQ16740 277 aaPredicted RBP13.11□□□□□ -0.31
RNF220-204ENST00000372247 NXNL2Q5VZ03 156 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 TMEM215Q68D42 235 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 CEACAM20Q6UY09 585 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 SPATC1Q76KD6 591 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 SLC7A5P1Q8MH63 180 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 HORMAD2Q8N7B1 307 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 DTD2Q96FN9 168 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 ERVK13-1Q9NX77 482 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 PLEKHB1Q9UF11 243 aaPredicted RBP13.11□□□□□ -0.31
RNF220-204ENST00000372247 ADAM29Q9UKF5 820 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 RAB23Q9ULC3 237 aa13.11□□□□□ -0.31
RNF220-204ENST00000372247 IRGMA1A4Y4 181 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 TRIM3O75382 744 aaPredicted RBP13.1□□□□□ -0.31
RNF220-204ENST00000372247 PAPLNO95428 1278 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 GNRH1P01148 92 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 H1F0P07305 194 aaKnown RBP13.1□□□□□ -0.31
RNF220-204ENST00000372247 MSL3P1P0C860 447 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 HSMCR30P0CW71 290 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 ACADMP11310 421 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 LAG3P18627 525 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 FGF9P31371 208 aaPredicted RBP13.1□□□□□ -0.31
RNF220-204ENST00000372247 CDK10Q15131 360 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 BAK1Q16611 211 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 DCST1Q5T197 706 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 ZNF648Q5T619 568 aaPredicted RBP13.1□□□□□ -0.31
RNF220-204ENST00000372247 TMEM220Q6QAJ8 160 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 RAB43Q86YS6 212 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 PLA2G15Q8NCC3 412 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 ZNF485Q8NCK3 441 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 SLAMF7Q9NQ25 335 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 WASH6PQ9NQA3 447 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 ACSS1Q9NUB1 689 aaPredicted RBP13.1□□□□□ -0.31
RNF220-204ENST00000372247 SAGE1Q9NXZ1 904 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 TMCC3Q9ULS5 477 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 A4GNTQ9UNA3 340 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 LRRK1Q38SD2 2015 aa13.1□□□□□ -0.31
RNF220-204ENST00000372247 SPINT1O43278 529 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 267.4 ms