RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ZNF514Q96K75 400 aaPredicted RBP13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZFP57Q9NU63 452 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 CALML5Q9NZT1 146 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 TNFRSF10DQ9UBN6 386 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 CHD4Q14839 1912 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 A0A0U1RQK1 487 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 ICMTO60725 284 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 CSTBP04080 98 aaKnown RBP13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 MAKP20794 623 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 NDUFS1P28331 727 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 C21orf62-AS1Q17RA5 79 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 ARHGAP11BQ3KRB8 267 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 PIGGQ5H8A4 983 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 RABL3Q5HYI8 236 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 TSTD2Q5T7W7 516 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC39A4Q6P5W5 647 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 UGT2A3Q6UWM9 527 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF852Q6ZMS4 543 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 AVL9Q8NBF6 648 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.52□□□□□ -0.241e-8■■■■■ 33.8
RAPGEF1-202ENST00000372190 C10orf82Q8WW14 230 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC25A36Q96CQ1 311 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 ARHGAP9Q9BRR9 750 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 LRTM1Q9HBL6 345 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 PLCXD1Q9NUJ7 323 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 C14orf119Q9NWQ9 140 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 COQ4Q9Y3A0 265 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 IQCF5A8MTL0 148 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 C9J4A7 227 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 CCL22O00626 93 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 SPDEFO95238 335 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 NT5EP21589 574 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 SMARCD3Q6STE5 483 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 UNC5BQ8IZJ1 945 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 OR1J4Q8NGS1 313 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 CNOT9Q92600 299 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 AURKBQ96GD4 344 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 TBX5Q99593 518 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 GON7Q9BXV9 100 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 MRPS30Q9NP92 439 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 LTBP4Q8N2S1 1624 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 EEF1E1O43324 174 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 PRAMEF2O60811 474 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 POLR2HP52434 150 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 NFATC4Q14934 902 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 MS4A13Q5J8X5 152 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 SCML4Q8N228 414 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 ANKRD53Q8N9V6 530 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 SNAPC3Q92966 411 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 BTF3L4Q96K17 158 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 STRA6Q9BX79 667 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 POLR2J3Q9H1A7 115 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 IPPKQ9H8X2 491 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 TGOLN2O43493 480 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 CIDEAO60543 219 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 TBX10O75333 385 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 SH3PXD2AQ5TCZ1 1133 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 SLC30A8Q8IWU4 369 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 CHTF18Q8WVB6 975 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 SMOQ99835 787 aa13.52□□□□□ -0.25
RAPGEF1-202ENST00000372190 A0A0G2JN53 185 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 MMP20O60882 483 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF623O75123 536 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 MATN4O95460 622 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 RETP07949 1114 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 DNAJA1P31689 397 aaKnown RBP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 NUDT1P36639 197 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 SCNN1AP37088 669 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 TPMTP51580 245 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 TARDBPQ13148 414 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 CLEC6AQ6EIG7 209 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 KIAA1161Q6NSJ0 714 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 PRSS58Q8IYP2 241 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 Q8N9G6 341 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 OR10G2Q8NGC3 310 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 KLHDC7BQ96G42 594 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 JSRP1Q96MG2 331 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 SPHK2Q9NRA0 654 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 POLHQ9Y253 713 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 C5P01031 1676 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 UPK3BL1B0FP48 263 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 UPK3BL2E5RIL1 263 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 COCHO43405 550 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 PUS10Q3MIT2 529 aaKnown RBP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 C9orf64Q5T6V5 341 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 OR4C5Q8NGB2 326 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 CORO2AQ92828 525 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 KATNBL1Q9H079 304 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 SACM1LQ9NTJ5 587 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 COPS7AQ9UBW8 275 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 PCDHGA6Q9Y5G7 932 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 LOC100130705A0A1B0GUX0 176 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 TXNDC12O95881 172 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 IMPDH1P20839 514 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 PROZP22891 400 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 CDK2P24941 298 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 WDR5P61964 334 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms