RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TRPS1Q9UHF7 1281 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 ORC6Q9Y5N6 252 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 PIKFYVEQ9Y2I7 2098 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 FLNCQ14315 2725 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 TCRBV5S2A0A599 114 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 SERTM1A2A2V5 107 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 PABPN1LA6NDY0 278 aaKnown RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 IQCF5A8MTL0 148 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 C9J4A7 227 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 FXYD1O00168 92 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 MEN1O00255 615 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 E2F3O00716 465 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 SOCS2O14508 198 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 PFDN1O60925 122 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 PRSS23O95084 383 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 SIX3O95343 332 aaPredicted RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 KRT6AP02538 564 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 KRT6BP04259 564 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 CD63P08962 238 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 ACPPP15309 386 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF12P17014 697 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 ATP6V1B2P21281 511 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 DCKP27707 260 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 PKLRP30613 574 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 CASRP41180 1078 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 KRT6CP48668 564 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 RAD23AP54725 363 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 GABARAPL2P60520 117 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 ADARB1P78563 741 aaKnown RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 TGFBIQ15582 683 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 ZC3H12BQ5HYM0 836 aaKnown RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 COLEC12Q5KU26 742 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 ATG9BQ674R7 924 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 USP51Q70EK9 711 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 EID3Q8N140 333 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 OR9I1Q8NGQ6 314 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 OR2L8Q8NGY9 312 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 C9orf43Q8TAL5 461 aaPredicted RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 DNAJB14Q8TBM8 379 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 LKAAEAR1Q8TD35 194 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 THAP4Q8WY91 577 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 HDAC2Q92769 488 aaKnown RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 LINGO1Q96FE5 620 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 METTL2AQ96IZ6 378 aaKnown RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 PPM1MQ96MI6 270 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 FAM210AQ96ND0 272 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 OR2A14Q96R47 310 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 CGREF1Q99674 301 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 RBM4BQ9BQ04 359 aaKnown RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 NTMT1Q9BV86 223 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 RBM4Q9BWF3 364 aaKnown RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 CHID1Q9BWS9 393 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 UNKQ9C0B0 810 aaKnown RBP9.86□□□□□ -0.83
COL5A1-202ENST00000371820 ING2Q9H160 280 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 CXorf21Q9HAI6 301 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 ACSS2Q9NR19 701 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 TBC1D23Q9NUY8 699 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 IRAK4Q9NWZ3 460 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 USE1Q9NZ43 259 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 GALPQ9UBC7 116 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 SRPK3Q9UPE1 567 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 PADI2Q9Y2J8 665 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 OARD1Q9Y530 152 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 HSPE1-MOB4S4R3N1 261 aa9.86□□□□□ -0.83
COL5A1-202ENST00000371820 LRRK2Q5S007 2527 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 ACOX3O15254 700 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 OR2B3O76000 313 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 F7P08709 466 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 RAB40ALP0C0E4 278 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 ETS2P15036 469 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 PVRP15151 417 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 F8A1P23610 371 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 CSNK2BP67870 215 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 SRSF1Q07955 248 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 LRRC74AQ0VAA2 488 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 GTF2H2Q13888 395 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 DAG1Q14118 895 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 ERV3-1Q14264 604 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 MAPKAPK3Q16644 382 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 MOGQ16653 247 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 DEFB109BQ30KR1 87 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF829Q3KNS6 432 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 GTF2H2CQ6P1K8 395 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 TRIM46Q7Z4K8 759 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 THAP5Q7Z6K1 395 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 GPR180Q86V85 440 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 HIPK1Q86Z02 1210 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 CLVS1Q8IUQ0 354 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 VRK3Q8IV63 474 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 RIMKLAQ8IXN7 391 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 C8orf59Q8N0T1 100 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 ZBTB2Q8N680 514 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 SETD9Q8NE22 299 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 OR1L3Q8NH93 324 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 PROKR1Q8TCW9 393 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 MAGEE2Q8TD90 523 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 UBTD2Q8WUN7 234 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 EEF1AKMT1Q8WVE0 214 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 CYGBQ8WWM9 190 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms