RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SLC29A4Q7RTT9 530 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 TMPRSS7Q7RTY8 843 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 TRMT10AQ8TBZ6 339 aaKnown RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 NANOGQ9H9S0 305 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 CEMIPQ8WUJ3 1361 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 TO15178 435 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 HOXB9P17482 250 aaPredicted RBP14.69□□□□□ -0.06
COL5A1-201ENST00000371817 PKLRP30613 574 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF546Q86UE3 836 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 PTTG3PQ9NZH4 202 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 EDNRBP24530 442 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 TMEM200AQ86VY9 491 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.69□□□□□ -0.06
COL5A1-201ENST00000371817 SMOXQ9NWM0 555 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 B3GALT1Q9Y5Z6 326 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 ZCCHC11Q5TAX3 1644 aaKnown RBP14.69□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF536O15090 1300 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 VIPP01282 170 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 ATP4BP51164 291 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 OR4D6Q8NGJ1 314 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 ELP4Q96EB1 424 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 DSC2Q02487 901 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 RAB11BQ15907 218 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 PDCD2LQ9BRP1 358 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 SLC32A1Q9H598 525 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 MAGIXQ9H6Y5 334 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 IL17RBQ9NRM6 502 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 ENPP5Q9UJA9 477 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 SALL4Q9UJQ4 1053 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 A8MT66 165 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 ACVR1BP36896 505 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 GAD2Q05329 585 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 UPP1Q16831 310 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF611Q8N823 705 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 RNF128Q8TEB7 428 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 B3GNT5Q9BYG0 378 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 B3GAT2Q9NPZ5 323 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 KIF25Q9UIL4 384 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 PCDHGA2Q9Y5H1 932 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 HEBP2Q9Y5Z4 205 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 CPQQ9Y646 472 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 A6NHS1 94 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 CD48P09326 243 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 PTPRRQ15256 657 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 GALNT13Q8IUC8 556 aa14.69□□□□□ -0.06
COL5A1-201ENST00000371817 GRM6O15303 877 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 FADS1O60427 444 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 PTPRAP18433 802 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF630Q2M218 657 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 LRIF1Q5T3J3 769 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 KIAA1211LQ6NV74 962 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SH3YL1Q96HL8 342 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 P2RY13Q9BPV8 354 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 OCSTAMPQ9BR26 566 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SOX17Q9H6I2 414 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ADAP2Q9NPF8 381 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 A0A087WZY1 265 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 INHAP05111 366 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 EPHX2P34913 555 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 CAPSQ13938 189 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 PROX2Q3B8N5 592 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 MAP1SQ66K74 1059 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 LCLAT1Q6UWP7 414 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SPATC1Q76KD6 591 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 KLBQ86Z14 1044 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF679Q8IYX0 411 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 OR10R2Q8NGX6 335 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 CDC6Q99741 560 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ACOT13Q9NPJ3 140 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ZFC3H1O60293 1989 aaKnown RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ARHGEF17Q96PE2 2063 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SPATA31A6Q5VVP1 1343 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 KIF13AQ9H1H9 1805 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ARGFXA6NJG6 315 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 RNF225M0QZC1 329 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 MED6O75586 246 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 PCLAFQ15004 111 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 IL17AQ16552 155 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 GPC2Q8N158 579 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 TRAPPC12Q8WVT3 735 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 PITHD1Q9GZP4 211 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 UTS2RQ9UKP6 389 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 MRPS23Q9Y3D9 190 aaKnown RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SEC14L2O76054 403 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 OR1E2P47887 323 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 GLUD2P49448 558 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 AKR1C2P52895 323 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 GINS1Q14691 196 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 KCTD18Q6PI47 426 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 CMKLR1Q99788 373 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 TSPAN10Q9H1Z9 355 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SPEF2Q9C093 1822 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 GABRDO14764 452 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 KLK1P06870 262 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 MLIPQ5VWP3 458 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 OR2A12Q8NGT7 310 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 TSPEARQ8WU66 669 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 FKBP10Q96AY3 582 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms