RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CDC40O60508 579 aaKnown RBP eCLIP14.09□□□□□ -0.15
NDC1-201ENST00000371429 BCAS2O75934 225 aaPredicted RBP14.09□□□□□ -0.15
NDC1-201ENST00000371429 GMPRP36959 345 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 OR3A3P47888 321 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 OR3A2P47893 321 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 RNF144AP50876 292 aaPredicted RBP14.09□□□□□ -0.15
NDC1-201ENST00000371429 KIR2DS3Q14952 304 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 TIGD6Q17RP2 521 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 ARFGAP1Q8N6T3 406 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 ANKFN1Q8N957 763 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 CD200R1Q8TD46 325 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 MKS1Q9NXB0 559 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 UPB1Q9UBR1 384 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 ING4Q9UNL4 249 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 CCL26Q9Y258 94 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 A0A1B0GVT2 93 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 A0A1W2PRQ8 180 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 ZNF99A8MXY4 864 aaPredicted RBP14.09□□□□□ -0.15
NDC1-201ENST00000371429 GPR37L1O60883 481 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 PAX7P23759 505 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 CLRN1P58418 232 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 GMFBP60983 142 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 ARF5P84085 180 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 CTBSQ01459 385 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 ZNF789Q5FWF6 425 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 COMMD6Q7Z4G1 85 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 ZNF101Q8IZC7 436 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 OR52P1PQ8NH57 321 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 C1orf216Q8TAB5 229 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 WDR77Q9BQA1 342 aaPredicted RBP14.09□□□□□ -0.15
NDC1-201ENST00000371429 PCTPQ9UKL6 214 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 FKBP7Q9Y680 259 aa14.09□□□□□ -0.15
NDC1-201ENST00000371429 J3QLW9 94 aa14.08□□□□□ -0.15
NDC1-201ENST00000371429 INMTO95050 263 aa14.08□□□□□ -0.15
NDC1-201ENST00000371429 ZNF19P17023 458 aa14.08□□□□□ -0.15
NDC1-201ENST00000371429 ACSL1P33121 698 aa14.08□□□□□ -0.15
NDC1-201ENST00000371429 DMPKQ09013 629 aa14.08□□□□□ -0.15
NDC1-201ENST00000371429 CBX3Q13185 183 aa14.08□□□□□ -0.15
NDC1-201ENST00000371429 SLC22A12Q96S37 553 aa14.08□□□□□ -0.15
NDC1-201ENST00000371429 FUT4P22083 530 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 PRKACGP22612 351 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 SLC9A3P48764 834 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 CLDN8P56748 225 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 TAS2R38P59533 333 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 RPS26P62854 115 aaKnown RBP14.08□□□□□ -0.16
NDC1-201ENST00000371429 SLC39A13Q96H72 371 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 PIGUQ9H490 435 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 MEAF6Q9HAF1 191 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 A0A0J9YY10 115 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 PRSS38A1L453 326 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 ACOT7O00154 380 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 H6PDO95479 791 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 IRS1P35568 1242 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 OR2B6P58173 313 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 E2F2Q14209 437 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 FGL2Q14314 439 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 NDUFAF5Q5TEU4 345 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 LARP4Q71RC2 724 aaKnown RBP eCLIP14.08□□□□□ -0.16
NDC1-201ENST00000371429 GPR150Q8NGU9 434 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 ASB15Q8WXK1 588 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 SEC14L1Q92503 715 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 TRIM36Q9NQ86 728 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 PEX16Q9Y5Y5 336 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 TMX2-CTNND1H3BSU7 103 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 RGRP47804 291 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 CTSCP53634 463 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 RPS3AP61247 264 aaKnown RBP14.08□□□□□ -0.16
NDC1-201ENST00000371429 LAPTM4AQ15012 233 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 CDKN3Q16667 212 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 GRHL2Q6ISB3 625 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 HMGN2P46Q86SG4 172 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 STON2Q8WXE9 905 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 NPLQ9BXD5 320 aaPredicted RBP14.08□□□□□ -0.16
NDC1-201ENST00000371429 DNAJC15Q9Y5T4 150 aa14.08□□□□□ -0.16
NDC1-201ENST00000371429 MYH3P11055 1940 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 A0A1W2PPL8 197 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 IVDP26440 423 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 MGAT3Q09327 533 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 SERTAD2Q14140 314 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 MLF2Q15773 248 aaPredicted RBP14.07□□□□□ -0.16
NDC1-201ENST00000371429 CTC1Q2NKJ3 1217 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 BTBD16Q32M84 506 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 JAGN1Q8N5M9 183 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 DNAJA3Q96EY1 480 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 MTMR10Q9NXD2 777 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 COMMD3Q9UBI1 195 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 NOS1APO75052 506 aaPredicted RBP14.07□□□□□ -0.16
NDC1-201ENST00000371429 ADORA3P0DMS8 318 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 SLC15A1P46059 708 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 ALDH3A2P51648 485 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 EMP2P54851 167 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 LIN52Q52LA3 116 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 RTN4RL1Q86UN2 441 aaPredicted RBP14.07□□□□□ -0.16
NDC1-201ENST00000371429 RAB43Q86YS6 212 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 TMEM151BQ8IW70 566 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 OR2L3Q8NG85 312 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 GNPDA2Q8TDQ7 276 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 DHRS1Q96LJ7 313 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 ANKRA2Q9H9E1 313 aa14.07□□□□□ -0.16
NDC1-201ENST00000371429 SRPK3Q9UPE1 567 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms