RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 RETREG1Q9H6L5 497 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 MGAT4CQ9UBM8 478 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 MAGED1Q9Y5V3 778 aaPredicted RBP16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 AGAP5A6NIR3 686 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 DISC1C4P0D8 188 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 GCGRP47871 477 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 LETMD1Q6P1Q0 360 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 ZNF783Q6ZMS7 281 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 KCTD9Q7L273 389 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 UBQLNLQ8IYU4 475 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 EPYCQ99645 322 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 C16orf70Q9BSU1 422 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 ZBTB20Q9HC78 741 aaPredicted RBP16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 Q9N2J8 555 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 NANSQ9NR45 359 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 SCAMP2O15127 329 aaKnown RBP16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 EDNRBP24530 442 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 PYCR1P32322 319 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 SOX2P48431 317 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 HNRNPFP52597 415 aaKnown RBP16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 C18orf21Q32NC0 220 aaPredicted RBP16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 CHDHQ8NE62 594 aaPredicted RBP16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 CASTOR1Q8WTX7 329 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 ARL6Q9H0F7 186 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 SLA2Q9H6Q3 261 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 ACSL6Q9UKU0 697 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 TSPAN6O43657 245 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 PRSS56P0CW18 603 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 CD9P21926 228 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 FAM189A2Q15884 450 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 ZNF792Q3KQV3 632 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 BAIAP2L2Q6UXY1 529 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 GDPGP1Q6ZNW5 385 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 ACBD7Q8N6N7 88 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 TMEM175Q9BSA9 504 aa16.43■□□□□ 0.22
PTP4A1-201ENST00000370651 BLOC1S5-TXNDC5H3BN57 136 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 H7BY64 318 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 TCEA1P23193 301 aaKnown RBP16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ACTC1P68032 377 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ACTA1P68133 377 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 MAD2L1BPQ15013 274 aaPredicted RBP16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 UBE2UQ5VVX9 321 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 DNM1P34Q6PK57 102 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 CCDC116Q8IYX3 515 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 PNPLA1Q8N8W4 532 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 POGLUT1Q8NBL1 392 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 PRAP1Q96NZ9 151 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 RNF121Q9H920 327 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 VAPAQ9P0L0 249 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 C7orf72A4D263 438 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 NARSO43776 548 aaKnown RBP16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 OR7A10O76100 309 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 TMEM69Q5SWH9 247 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 DLK2Q6UY11 383 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 OTOP2Q7RTS6 562 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 C6orf120Q7Z4R8 191 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 OR8S1Q8NH09 359 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ASB15Q8WXK1 588 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 MTG2Q9H4K7 406 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ZDHHC4Q9NPG8 344 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 NUFIP1Q9UHK0 495 aaKnown RBP16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 KDM3BQ7LBC6 1761 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 IGKV6D-21A0A0A0MT36 114 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ZNF878C9JN71 531 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 PCDHGA12O60330 932 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 APOC3P02656 99 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ALPPL2P10696 532 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 LAMP1P11279 417 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 HMGCLP35914 325 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 SLC11A1P49279 550 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 EIF4HQ15056 248 aaKnown RBP16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 C1orf189Q5VU69 101 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ANKRD54Q6NXT1 300 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 KIF18BQ86Y91 864 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 NPLOC4Q8TAT6 608 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 SETD6Q8TBK2 473 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 MAL2Q969L2 176 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ZNF350Q9GZX5 532 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 DCAF13Q9NV06 445 aaKnown RBP16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 ENPP4Q9Y6X5 453 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 CRHBPP24387 322 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 MTNR1AP48039 350 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 UAP1L1Q3KQV9 507 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 AUTS2Q8WXX7 1259 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 NSMAFQ92636 917 aa16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 FBXO9Q9UK97 447 aaPredicted RBP16.42■□□□□ 0.22
PTP4A1-201ENST00000370651 PHRF1Q9P1Y6 1649 aaKnown RBP16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 A0A1W2PPK0 400 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 RPS26P62854 115 aaKnown RBP16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 SLC44A3Q8N4M1 653 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 BRI3BPQ8WY22 251 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 INPP5KQ9BT40 448 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 XKR8Q9H6D3 395 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 LAMP5Q9UJQ1 280 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 COCHO43405 550 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 EMX1Q04741 257 aaPredicted RBP16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 TMEM130Q8N3G9 435 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 ZNF461Q8TAF7 563 aa16.41■□□□□ 0.22
PTP4A1-201ENST00000370651 PMM1Q92871 262 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms