RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 C6orf183Q5T699 404 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 TRIQKQ629K1 86 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 FIGLAQ6QHK4 219 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 CARM1Q86X55 608 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 CADM2Q8N3J6 435 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 NUP43Q8NFH3 380 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 OR52E1Q8NGJ3 308 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 OR4C6Q8NH72 309 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 RPLP0P6Q8NHW5 317 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 COQ10AQ96MF6 247 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 DPH2Q9BQC3 489 aaPredicted RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 NDC1Q9BTX1 674 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 FAM118AQ9NWS6 357 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 NUMBLQ9Y6R0 609 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 TSPAN11A1L157 253 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 PRRT4C9JH25 899 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC30A4O14863 429 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 VILLO15195 856 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF821O75541 412 aaPredicted RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 RCBTB2O95199 551 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 IGHA2P01877 340 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 STATHP02808 62 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 RPLP0P05388 317 aaKnown RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 C8orf89P0DMQ9 161 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 OR12D1P0DN82 309 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 RNH1P13489 461 aaKnown RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 TYRP1P17643 537 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 HNRNPKP61978 463 aaKnown RBP eCLIP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 SELENOWP63302 87 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 GPR68Q15743 365 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 DEFB134Q4QY38 66 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 CYHR1Q6ZMK1 362 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 LAPTM4BQ86VI4 370 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 CSNK1A1LQ8N752 337 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 FAM98AQ8NCA5 519 aaKnown RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 OR8K5Q8NH50 307 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.07□□□□□ -1.61e-6■■■■□ 23.8
SMNDC1-202ENST00000369603 KLHL6Q8WZ60 621 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 GAL3ST3Q96A11 431 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 ZFYVE21Q9BQ24 234 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 CPPED1Q9BRF8 314 aaPredicted RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 OR51I1Q9H343 314 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 SERHL2Q9H4I8 314 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 MKKSQ9NPJ1 570 aaPredicted RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 SERHLQ9NQF3 203 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 ACSS1Q9NUB1 689 aaPredicted RBP5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 NLGN3Q9NZ94 848 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 TMEM5Q9Y2B1 443 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 CLCA3PQ9Y6N3 262 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 ENPP4Q9Y6X5 453 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 SIP14410 1827 aa5.07□□□□□ -1.6
SMNDC1-202ENST00000369603 A0A0G2JPF8 293 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 CENPXA8MT69 81 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 HNRNPCL3B7ZW38 293 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 TPST2O60704 377 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 HNRNPCL4P0DMR1 293 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 MYL9P24844 172 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 DCTP40126 519 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 PGDP52209 483 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 MRPL28Q13084 256 aaKnown RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 NDUFA5Q16718 116 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 MEP1AQ16819 746 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 CCDC157Q569K6 752 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 MEDAGQ5VYS4 303 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 TMEM53Q6P2H8 277 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 Q6ZSR6 202 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 TSPYL5Q86VY4 417 aaPredicted RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 NAGSQ8N159 534 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF548Q8NEK5 533 aaPredicted RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 TFAP2CQ92754 450 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 RIT1Q92963 219 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF419Q96HQ0 510 aaPredicted RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 EGLN2Q96KS0 407 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF583Q96ND8 569 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 SERINC2Q96SA4 455 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 TOR4AQ9NXH8 423 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 PRODH2Q9UF12 536 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 SERTAD3Q9UJW9 196 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 BTBD3Q9Y2F9 522 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 PCDHGB1Q9Y5G3 927 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 CEPT1Q9Y6K0 416 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 LCTP09848 1927 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 IGLV3-16A0A075B6K0 115 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 SAGE2PA6NJ88 616 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 FAM170BA6NMN3 283 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 OR52A4PA6NMU1 304 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 PIM1P11309 404 aaPredicted RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 F3P13726 295 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 IL12BP29460 328 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 CTHP32929 405 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 GRK6P43250 576 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 OR1E2P47887 323 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 SOX9P48436 509 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 VASPP50552 380 aaPredicted RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 VSX2P58304 361 aaPredicted RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 POU6F2P78424 691 aaPredicted RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 HHEXQ03014 270 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 NPRL3Q12980 569 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 RAB39AQ14964 217 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms