RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 M0R129 80 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 KLHL18O94889 574 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 SBK3P0C264 359 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 TFPIP10646 304 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ITGAMP11215 1152 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 GJA8P48165 433 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 SLAMF1Q13291 335 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ELAVL3Q14576 367 aaKnown RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 RPTNQ6XPR3 784 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 DENND6BQ8NEG7 585 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ZFP90Q8TF47 636 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ITFG2Q969R8 447 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 NEIL2Q969S2 332 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 TESCQ96BS2 214 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 SIPA1Q96FS4 1042 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 CNDP2Q96KP4 475 aaKnown RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 C5orf34Q96MH7 638 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 EPYCQ99645 322 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 CPPED1Q9BRF8 314 aaPredicted RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 BRF2Q9HAW0 419 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 TNFRSF12AQ9NP84 129 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ZDHHC4Q9NPG8 344 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 MED31Q9Y3C7 131 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ANXA2P2A6NMY6 339 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ADAP00813 363 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 KLKB1P03952 638 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ANXA2P07355 339 aaKnown RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 AOAHP28039 575 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 GMFBP60983 142 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 SPCS2Q15005 226 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 SBSNQ6UWP8 590 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 B3GNT8Q7Z7M8 397 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 LHFPL3Q86UP9 236 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 OR10H5Q8NGA6 315 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 RELTQ969Z4 430 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 SH3YL1Q96HL8 342 aaPredicted RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 ZNF300Q96RE9 604 aaPredicted RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 KATNBL1Q9H079 304 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 NMNAT1Q9HAN9 279 aaPredicted RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 PCDHGB7Q9Y5F8 929 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 GABRR3A8MPY1 467 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 FAM25EA8MYX2 175 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 CPNE3O75131 537 aaKnown RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 OXSR1O95747 527 aaPredicted RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 ASGR2P07307 311 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 HRH2P25021 359 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 POLR2IP36954 125 aaKnown RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 MC1RQ01726 317 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 DCDC5Q6ZRR9 648 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 PTRH1Q86Y79 214 aaKnown RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 ATP6V1C2Q8NEY4 427 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ASB11Q8WXH4 323 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 ECHDC3Q96DC8 303 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 MCCC1Q96RQ3 725 aaPredicted RBP11.17□□□□□ -0.62
COPA-202ENST00000368069 GINS4Q9BRT9 223 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 SLC2A11Q9BYW1 496 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 NLGN3Q9NZ94 848 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 FKBP7Q9Y680 259 aa11.17□□□□□ -0.62
COPA-202ENST00000368069 H7C0S8 307 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 PCSK6P29122 969 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 TMEM107Q6UX40 140 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 SIX5Q8N196 739 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 PXYLP1Q8TE99 480 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 MOAP1Q96BY2 351 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 PLAC1Q9HBJ0 212 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 ZBTB20Q9HC78 741 aaPredicted RBP11.16□□□□□ -0.62
COPA-202ENST00000368069 CCDC59Q9P031 241 aaKnown RBP11.16□□□□□ -0.62
COPA-202ENST00000368069 ELOA3DA6NLF2 546 aaPredicted RBP11.16□□□□□ -0.62
COPA-202ENST00000368069 PDCD5O14737 125 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 JRKO75564 520 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 REM1O75628 298 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 IGLV3-25P01717 112 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 CTSCP53634 463 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 RELAQ04206 551 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 ELOA3BQ3SY89 546 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 TBRG1Q3YBR2 411 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 KHDRBS2Q5VWX1 349 aaKnown RBP11.16□□□□□ -0.62
COPA-202ENST00000368069 PRSS58Q8IYP2 241 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 TOMM5Q8N4H5 51 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 NUP43Q8NFH3 380 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 ELOA3Q8NG57 546 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 JPH3Q8WXH2 748 aaPredicted RBP11.16□□□□□ -0.62
COPA-202ENST00000368069 COMMD4Q9H0A8 199 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 ELL3Q9HB65 397 aaPredicted RBP11.16□□□□□ -0.62
COPA-202ENST00000368069 BRD7Q9NPI1 651 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 KLHL42Q9P2K6 505 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 SARDHQ9UL12 918 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 CDH7Q9ULB5 785 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 SH3D21A4FU49 640 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 ZNF860A6NHJ4 632 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 RNASET2O00584 256 aaKnown RBP11.16□□□□□ -0.62
COPA-202ENST00000368069 EDNRAP25101 427 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 TGFBR2P37173 567 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 HSF2Q03933 536 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 MGAT3Q09327 533 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 TOMM20Q15388 145 aa11.16□□□□□ -0.62
COPA-202ENST00000368069 SMN1Q16637 294 aaKnown RBP11.16□□□□□ -0.62
COPA-202ENST00000368069 PAMR1Q6UXH9 720 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms